Arlindo L. Oliveira

156 papers A* 7A 8B 12C 17Misc 7Journal 70Unranked 33

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	ADAPT: Hybrid Prompt Optimization for LLM Feature Visualization. CoRR João N. Cardoso, Arlindo L. Oliveira, Bruno Martins
2026	J	`jnl`	Engineering FAIR Privacy-preserving Applications that Learn Histories of Disease. CoRR Ines Duarte, Praphulla M. S. Bhawsar, Lee Mason, Jeya Balaji Balasubramanian, Daniel E. Russ, Arlindo L. Oliveira, Jonas S. Almeida
2025	J	`jnl`	Are ECGs enough? Deep learning classification of cardiac anomalies using only electrocardiograms. CoRR João D. S. Marques, Arlindo L. Oliveira
2025	J	`jnl`	CountPath: Automating Fragment Counting in Digital Pathology. CoRR Ana Beatriz Vieira, Maria Valente, Diana Montezuma, Tomé Albuquerque, Liliana Ribeiro, Domingos Oliveira, João C. Monteiro, Sofia Gonçalves, Isabel M. Pinto, Jaime S. Cardoso, Arlindo L. Oliveira
2025	A*	`conf`	DIS-CO: Discovering Copyrighted Content in VLMs Training Data. ICML André V. Duarte, Xuandong Zhao, Arlindo L. Oliveira, Lei Li
2025	J	`jnl`	DIS-CO: Discovering Copyrighted Content in VLMs Training Data. CoRR André V. Duarte, Xuandong Zhao, Arlindo L. Oliveira, Lei Li
2025	J	`jnl`	Deep Feedback Models. CoRR David Calhas, Arlindo L. Oliveira
2025	J	`jnl`	Deep Recurrence for Dynamical Segmentation Models. CoRR David Calhas, Arlindo L. Oliveira
2025	J	`jnl`	Enhancing the Interpretation of Spirometry: Joint Utilization of n-Order Adaptive Fourier Decomposition and Deep Learning Techniques. IEEE Trans. Instrum. Meas. Xuanfeng Li, Yuxi Lin, Wei He, Ruibin Liu, Arlindo L. Oliveira, Tao Qian, Jinping Zheng, Chitin Hon
2025	J	`jnl`	Explicitly Modeling Subcortical Vision with a Neuro-Inspired Front-End Improves CNN Robustness. CoRR Lucas Piper, Arlindo L. Oliveira, Tiago Marques
2025	J	`jnl`	Fractal Language Modelling by Universal Sequence Maps (USM). CoRR Jonas S. Almeida, Daniel E. Russ, Susana Vinga, Ines Duarte, Lee Mason, Praphulla M. S. Bhawsar, Aaron Ge, Arlindo L. Oliveira, Jeya Balaji Balasubramanian
2025	—	`conf`	Leveraging LLMs to Streamline the Review of Public Funding Applications. EMNLP (Industry Track) João D. S. Marques, André V. Duarte, André Mendes Marques de Carvalho, Gil Rocha, Bruno Martins, Arlindo L. Oliveira
2025	J	`jnl`	Leveraging LLMs to Streamline the Review of Public Funding Applications. CoRR João D. S. Marques, André V. Duarte, André Mendes Marques de Carvalho, Gil Rocha, Bruno Martins, Arlindo L. Oliveira
2025	J	`jnl`	RECAP: Reproducing Copyrighted Data from LLMs Training with an Agentic Pipeline. CoRR André V. Duarte, Xuying Li, Bin Zeng, Arlindo L. Oliveira, Lei Li, Zhuo Li
2025	J	`jnl`	The role of positional encodings in the ARC benchmark. CoRR Guilherme H. Bandeira Costa, Miguel Freire, Arlindo L. Oliveira
2024	A	`conf`	Contribution of V1 Receptive Field Properties to Corruption Robustness in CNNs. ECAI Ruxandra Barbulescu, Tiago Marques, Arlindo L. Oliveira
2024	A*	`conf`	DE-COP: Detecting Copyrighted Content in Language Models Training Data. ICML André V. Duarte, Xuandong Zhao, Arlindo L. Oliveira, Lei Li
2024	J	`jnl`	DE-COP: Detecting Copyrighted Content in Language Models Training Data. CoRR André V. Duarte, Xuandong Zhao, Arlindo L. Oliveira, Lei Li
2024	J	`jnl`	Explicitly Modeling Pre-Cortical Vision with a Neuro-Inspired Front-End Improves CNN Robustness. CoRR Lucas Piper, Arlindo L. Oliveira, Tiago Marques
2024	J	`jnl`	Finding Regions of Interest in Whole Slide Images Using Multiple Instance Learning. CoRR Martim Afonso, Praphulla M. S. Bhawsar, Monjoy Saha, Jonas S. Almeida, Arlindo L. Oliveira
2024	—	`conf`	LumberChunker: Long-Form Narrative Document Segmentation. EMNLP (Findings) André V. Duarte, João D. S. Marques, Miguel Graça, Miguel Freire, Lei Li, Arlindo L. Oliveira
2024	J	`jnl`	LumberChunker: Long-Form Narrative Document Segmentation. CoRR André V. Duarte, João D. S. Marques, Miguel Graça, Miguel Freire, Lei Li, Arlindo L. Oliveira
2024	J	`jnl`	QUBIQ: Uncertainty Quantification for Biomedical Image Segmentation Challenge. CoRR Hongwei Bran Li, Fernando Navarro, Ivan Ezhov, Amirhossein Bayat, Dhritiman Das, Florian Kofler, Suprosanna Shit, Diana Waldmannstetter, Johannes C. Paetzold, Xiaobin Hu, Benedikt Wiestler, Lucas Zimmer, Tamaz Amiranashvili, Chinmay Prabhakar, Christoph Berger, Jonas Weidner, Michelle Alonso-Basanta, Arif Rashid, Ujjwal Baid, Wesam Adel, Deniz Alis, Bhakti Baheti, Yingbin Bai, Ishaan Bhat, Sabri Can Cetindag, Wenting Chen, Li Cheng, Prasad Dutande, Lara Dular, Mustafa A. Elattar, Ming Feng, Shengbo Gao, Henkjan Huisman, Weifeng Hu, Shubham Innani, Wei Jiat, Davood Karimi, Hugo J. Kuijf, Jin Tae Kwak, Hoang Long Le, Xiang Lia, Huiyan Lin, Tongliang Liu, Jun Ma, Kai Ma, Ting Ma, Ilkay Öksüz, Robbie Holland, Arlindo L. Oliveira, Jimut Bahan Pal, Xuan Pei, Maoying Qiao, Anindo Saha, Raghavendra Selvan, Linlin Shen, João Lourenço Silva, Ziga Spiclin, Sanjay N. Talbar, Dadong Wang, Wei Wang, Xiong Wang, Yin Wang, Ruiling Xia, Kele Xu, Yanwu Yan, Mert Yergin, Shuang Yu, Lingxi Zeng, YingLin Zhang, Jiachen Zhao, Yefeng Zheng, Martin Zukovec, Richard K. G. Do, Anton S. Becker, Amber L. Simpson, Ender Konukoglu, András Jakab, Spyridon Bakas, Leo Joskowicz, Bjoern H. Menze
2024	J	`jnl`	The Role of Recurrency in Image Segmentation for Noisy and Limited Sample Settings. CoRR David Calhas, João D. S. Marques, Arlindo L. Oliveira
2023	C	`conf`	Augmentation-Based Approaches for Overcoming Low Visibility in Street Object Detection. ICMLA João Pedro Novo, Manuel Goulão, Lourenço Bandeira, Bruno Martins, Arlindo L. Oliveira
2023	J	`jnl`	Connecting metrics for shape-texture knowledge in computer vision. CoRR Tiago Oliveira, Tiago Marques, Arlindo L. Oliveira
2023	J	`jnl`	DeepThought: An Architecture for Autonomous Self-motivated Systems. CoRR Arlindo L. Oliveira, Tiago Domingos, Mário A. T. Figueiredo, Pedro U. Lima
2023	—	`conf`	Improving Address Matching Using Siamese Transformer Networks. EPIA (2) André V. Duarte, Arlindo L. Oliveira
2023	J	`jnl`	Improving Address Matching using Siamese Transformer Networks. CoRR André V. Duarte, Arlindo L. Oliveira
2023	C	`conf`	Improving Embeddings for High-Accuracy Transformer-Based Address Matching Using a Multiple in-Batch Negatives Loss. ICMLA André V. Duarte, Arlindo L. Oliveira
2023	J	`jnl`	Matching the Neuronal Representations of V1 is Necessary to Improve Robustness in CNNs with V1-like Front-ends. CoRR Ruxandra Barbulescu, Tiago Marques, Arlindo L. Oliveira
2023	A	`conf`	Pretraining the Vision Transformer Using Self-Supervised Methods for Vision Based Deep Reinforcement Learning. ECAI Manuel Goulão, Arlindo L. Oliveira
2022	Misc	`conf`	Assessing Policy, Loss and Planning Combinations in Reinforcement Learning Using a New Modular Architecture. EPIA Tiago Gaspar Oliveira, Arlindo L. Oliveira
2022	J	`jnl`	Assessing Policy, Loss and Planning Combinations in Reinforcement Learning using a New Modular Architecture. CoRR Tiago Gaspar Oliveira, Arlindo L. Oliveira
2022	B	`conf`	Assessing the Impact of Attention and Self-Attention Mechanisms on the Classification of Skin Lesions. IJCNN Rafael Pedro, Arlindo L. Oliveira
2022	J	`jnl`	Modeling the Geospatial Evolution of COVID-19 using Spatio-temporal Convolutional Sequence-to-sequence Neural Networks. ACM Trans. Spatial Algorithms Syst. Mário Cardoso, André Cavalheiro, Alexandre Borges, Ana Filipa Duarte, Amílcar Soares, Maria João Pereira, Nuno Jardim Nunes, Leonardo Azevedo, Arlindo L. Oliveira
2022	J	`jnl`	Pretraining the Vision Transformer using self-supervised methods for vision based Deep Reinforcement Learning. CoRR Manuel Goulão, Arlindo L. Oliveira
2022	—	`conf`	Stenosis Detection in X-ray Coronary Angiography with Deep Neural Networks Leveraged by Attention Mechanisms. ICBRA Pedro Van Stralen, Dinis L. Rodrigues, Arlindo L. Oliveira, Miguel Nobre Menezes, Fausto J. Pinto
2022	Misc	`conf`	Using a Siamese Network to Accurately Detect Ischemic Stroke in Computed Tomography Scans. EPIA Ana Beatriz Vieira, Ana Catarina Fonseca, José M. Ferro, Arlindo L. Oliveira
2021	J	`jnl`	Assessing the Impact of Attention and Self-Attention Mechanisms on the Classification of Skin Lesions. CoRR Rafael Pedro, Arlindo L. Oliveira
2021	J	`jnl`	Automated Detection of Coronary Artery Stenosis in X-ray Angiography using Deep Neural Networks. CoRR Dinis L. Rodrigues, Miguel Nobre Menezes, Fausto J. Pinto, Arlindo L. Oliveira
2021	J	`jnl`	Combining Off and On-Policy Training in Model-Based Reinforcement Learning. CoRR Alexandre Borges, Arlindo L. Oliveira
2021	—	`conf`	Encoder-Decoder Architectures for Clinically Relevant Coronary Artery Segmentation. ICCABS João Lourenço Silva, Miguel Nobre Menezes, Tiago Rodrigues, Beatriz Silva, Fausto J. Pinto, Arlindo L. Oliveira
2021	J	`jnl`	Encoder-Decoder Architectures for Clinically Relevant Coronary Artery Segmentation. CoRR João Lourenço Silva, Miguel Nobre Menezes, Tiago Rodrigues, Beatriz Silva, Fausto J. Pinto, Arlindo L. Oliveira
2021	J	`jnl`	Graph Neural Networks for Traffic Forecasting. CoRR João Rico, José Barateiro, Arlindo L. Oliveira
2021	J	`jnl`	Modeling the geospatial evolution of COVID-19 using spatio-temporal convolutional sequence-to-sequence neural networks. CoRR Mário Cardoso, André Cavalheiro, Alexandre Borges, Ana Filipa Duarte, Amílcar Soares, Maria João Pereira, Nuno Jardim Nunes, Leonardo Azevedo, Arlindo L. Oliveira
2021	J	`jnl`	Modelling Neuronal Behaviour with Time Series Regression: Recurrent Neural Networks on C. Elegans Data. CoRR Gonçalo Mestre, Ruxandra Barbulescu, Arlindo L. Oliveira, L. Miguel Silveira
2021	—	`conf`	Using Soft Labels to Model Uncertainty in Medical Image Segmentation. BrainLes@MICCAI (2) João Lourenço Silva, Arlindo L. Oliveira
2021	J	`jnl`	Using Soft Labels to Model Uncertainty in Medical Image Segmentation. CoRR João Lourenço Silva, Arlindo L. Oliveira
2018	—	`book`	Computer Architecture - Digital Circuits to Microprocessors Computer Architecture Guilherme Arroz, José Monteiro, Arlindo L. Oliveira
2018	J	`jnl`	Conditional Random Fields as Recurrent Neural Networks for 3D Medical Imaging Segmentation. CoRR Miguel Monteiro, Mário A. T. Figueiredo, Arlindo L. Oliveira
2018	J	`jnl`	Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients. IEEE ACM Trans. Comput. Biol. Bioinform. Miguel Monteiro, Ana Catarina Fonseca, Ana Teresa Freitas, Teresa Pinho e Melo, Alexandre P. Francisco, José M. Ferro, Arlindo L. Oliveira
2012	J	`jnl`	Mining query log graphs towards a query folksonomy. Concurr. Comput. Pract. Exp. Alexandre P. Francisco, Ricardo Baeza-Yates, Arlindo L. Oliveira
2011	J	`jnl`	Discriminative Learning of Bayesian Networks via Factorized Conditional Log-Likelihood. J. Mach. Learn. Res. Alexandra M. Carvalho, Teemu Roos, Arlindo L. Oliveira, Petri Myllymäki
2011	J	`jnl`	Efficient alignment of pyrosequencing reads for re-sequencing applications. BMC Bioinform. Francisco Fernandes, Paulo G. S. da Fonseca, Luís M. S. Russo, Arlindo L. Oliveira, Ana T. Freitas
2011	J	`jnl`	Fully compressed suffix trees. ACM Trans. Algorithms Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira
2011	J	`jnl`	GRISOTTO: A greedy approach to improve combinatorial algorithms for motif discovery with prior knowledge. Algorithms Mol. Biol. Alexandra M. Carvalho, Arlindo L. Oliveira
2011	J	`jnl`	Haplotype inference with pseudo-Boolean optimization. Ann. Oper. Res. Ana Graça, João Marques-Silva, Inês Lynce, Arlindo L. Oliveira
2011	J	`jnl`	Quantitative Modeling of the J. Bioinform. Comput. Biol. Dulce Calçada, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira
2011	—	`conf`	Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism. HISB Dulce Calçada, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira
2011	B	`conf`	Sliding Window Update Using Suffix Arrays. DCC Artur J. Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo
2011	J	`jnl`	TFRank: network-based prioritization of regulatory associations underlying transcriptional responses. Bioinform. Joana P. Gonçalves, Alexandre P. Francisco, Nuno P. Mira, Miguel C. Teixeira, Isabel Sá-Correia, Arlindo L. Oliveira, Sara C. Madeira
2011	J	`jnl`	YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Nucleic Acids Res. Dário Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra Costa dos Santos, Tânia Rodrigues Cabrito, Alexandre P. Francisco, Sara C. Madeira, Ricardo Santos Aires, Arlindo L. Oliveira, Isabel Sá-Correia, Ana T. Freitas
2010	—	`conf`	A Data Mining Approach for the Detection of High-Risk Breast Cancer Groups. IWPACBB Orlando Anunciação, Bruno C. Gomes, Susana Vinga, Jorge Gaspar, Arlindo L. Oliveira, José Rueff
2010	A*	`conf`	Apt-pbo: solving the software dependency problem using pseudo-boolean optimization. ASE Paulo Trezentos, Inês Lynce, Arlindo L. Oliveira
2010	—	`conf`	Efficient and Accurate Haplotype Inference by Combining Parsimony and Pedigree Information. ANB Ana Graça, Inês Lynce, João Marques-Silva, Arlindo L. Oliveira
2010	—	`conf`	Fully Generalized Graph Cores. CompleNet Alexandre P. Francisco, Arlindo L. Oliveira
2010	J	`jnl`	Haplotype Inference by Pure Parsimony: A Survey. J. Comput. Biol. Ana Graça, Inês Lynce, João Marques-Silva, Arlindo L. Oliveira
2010	J	`jnl`	Identification of Regulatory Modules in Time Series Gene Expression Data Using a Linear Time Biclustering Algorithm. IEEE ACM Trans. Comput. Biol. Bioinform. Sara C. Madeira, Miguel C. Teixeira, Isabel Sá-Correia, Arlindo L. Oliveira
2010	C	`conf`	Mining Large Query Induced Graphs towards a Hierarchical Query Folksonomy. SPIRE Alexandre P. Francisco, Ricardo Baeza-Yates, Arlindo L. Oliveira
2010	—	`conf`	On Community Detection in Very Large Networks. CompleNet Alexandre P. Francisco, Arlindo L. Oliveira
2010	B	`conf`	Parallel and Distributed Compressed Indexes. CPM Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira
2010	—	`conf`	Using graph modularity analysis to identify transcription factor binding sites. BIBM Workshops Alexandre P. Francisco, Sophie Schbath, Ana T. Freitas, Arlindo L. Oliveira
2009	J	`jnl`	A polynomial time biclustering algorithm for finding approximate expression patterns in gene expression time series. Algorithms Mol. Biol. Sara C. Madeira, Arlindo L. Oliveira
2009	J	`jnl`	Approximate String Matching with Compressed Indexes. Algorithms Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira, Pedro Morales
2009	J	`jnl`	Constant Time Clash Detection in protein Folding. J. Bioinform. Comput. Biol. Miguel M. F. Bugalho, Arlindo L. Oliveira
2009	—	`conf`	Efficient Biclustering Algorithms for Time Series Gene Expression Data Analysis. IWANN (2) Sara C. Madeira, Arlindo L. Oliveira
2009	J	`jnl`	On the Use of Suffix Arrays for Memory-Efficient Lempel-Ziv Data Compression CoRR Artur J. Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo
2009	B	`conf`	On the Use of Suffix Arrays for Memory-Efficient Lempel-Ziv Data Compression. DCC Artur J. Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo
2009	J	`jnl`	Time and Memory Efficient Lempel-Ziv Compression Using Suffix Arrays CoRR Artur J. Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo
2008	J	`jnl`	A compressed self-index using a Ziv-Lempel dictionary. Inf. Retr. Luís M. S. Russo, Arlindo L. Oliveira
2008	—	`conf`	An Evaluation of the Impact of Side Chain Positioning on the Accuracy of Discrete Models of Protein Structures. BSB Miguel M. F. Bugalho, Arlindo L. Oliveira
2008	J	`jnl`	An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance. BMC Bioinform. Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira
2008	C	`conf`	Clique Analysis of Query Log Graphs. SPIRE Alexandre P. Francisco, Ricardo Baeza-Yates, Arlindo L. Oliveira
2008	B	`conf`	Dynamic Fully-Compressed Suffix Trees. CPM Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira
2008	B	`conf`	Efficient Haplotype Inference with Combined CP and OR Techniques. CPAIOR Ana Graça, João Marques-Silva, Inês Lynce, Arlindo L. Oliveira
2008	B	`conf`	Fully-Compressed Suffix Trees. LATIN Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira
2008	—	`conf`	Haplotype Inference with Boolean Constraint Solving: An Overview. ICTAI (1) Inês Lynce, Ana Graça, João Marques-Silva, Arlindo L. Oliveira
2008	—	`conf`	Identification of Transcription Factor Binding Sites in Promoter Regions by Modularity Analysis of the Motif Co-occurrence Graph. ISBRA Alexandre P. Francisco, Arlindo L. Oliveira, Ana T. Freitas
2008	C	`conf`	Indexed Hierarchical Approximate String Matching. SPIRE Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira
2008	—	`conf`	On the Suitability of Suffix Arrays for Lempel-Ziv Data Compression. ICETE (Selected Papers) Artur J. Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo
2008	—	`conf`	Ontology Design Principles and Normalization Techniques in the Web. DILS Xiaoshu Wang, Jonas S. Almeida, Arlindo L. Oliveira
2008	—	`conf`	Suffix Arrays - A Competitive Choice for Fast Lempel-Ziv Compressions. SIGMAP Artur J. Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo
2008	J	`jnl`	Using Grammatical Inference Techniques to Learn Ontologies that Describe the Structure of Domain Instances. Appl. Artif. Intell. André L. Martins, Helena Sofia Pinto, Arlindo L. Oliveira
2008	J	`jnl`	YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Nucleic Acids Res. Pedro T. Monteiro, Nuno D. Mendes, Miguel C. Teixeira, Sofia d'Orey, Sandra Tenreiro, Nuno P. Mira, Hélio Pais, Alexandre P. Francisco, Alexandra M. Carvalho, Artur B. Lourenço, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas
2007	B	`conf`	An Efficient Biclustering Algorithm for Finding Genes with Similar Patterns in Time-series Expression Data. APBC Sara C. Madeira, Arlindo L. Oliveira
2007	C	`conf`	Approximate String Matching with Lempel-Ziv Compressed Indexes. SPIRE Luís M. S. Russo, Gonzalo Navarro, Arlindo L. Oliveira
2007	—	`conf`	Efficient Haplotype Inference with Pseudo-boolean Optimization. AB Ana Graça, João Marques-Silva, Inês Lynce, Arlindo L. Oliveira
2007	—	`conf`	Efficient Learning of Bayesian Network Classifiers. Australian Conference on Artificial Intelligence Alexandra M. Carvalho, Arlindo L. Oliveira, Marie-France Sagot
2007	—	`conf`	Efficient and Tight Upper Bounds for Haplotype Inference by Pure Parsimony Using Delayed Haplotype Selection. EPIA Workshops João Marques-Silva, Inês Lynce, Ana Graça, Arlindo L. Oliveira
2007	J	`jnl`	Efficient generation of super condensed neighborhoods. J. Discrete Algorithms Luís M. S. Russo, Arlindo L. Oliveira
2007	C	`conf`	Learning bayesian networks consistent with the optimal branching. ICMLA Alexandra M. Carvalho, Arlindo L. Oliveira
2007	Misc	`conf`	Semi-supervised single-label text categorization using centroid-based classifiers. SAC Ana Cardoso-Cachopo, Arlindo L. Oliveira
2006	C	`conf`	A Compressed Self-index Using a Ziv-Lempel Dictionary. SPIRE Luís M. S. Russo, Arlindo L. Oliveira
2006	J	`jnl`	An Efficient Algorithm for the Identification of Structured Motifs in DNA Promoter Sequences. IEEE ACM Trans. Comput. Biol. Bioinform. Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot
2006	—	`conf`	DFT and Probabilistic Testability Analysis at RTL. HLDVT José M. Fernandes, Marcelino B. Santos, Arlindo L. Oliveira, João Paulo Cacho Teixeira
2006	C	`conf`	Dotted Suffix Trees A Structure for Approximate Text Indexing. SPIRE Luís Pedro Coelho, Arlindo L. Oliveira
2006	J	`jnl`	MUSA: a parameter free algorithm for the identification of biologically significant motifs. Bioinform. Nuno D. Mendes, Ana C. Casimiro, Pedro M. Santos, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas
2006	C	`conf`	Probabilistic Testability Analysis and DFT Methods at RTL. DDECS José M. Fernandes, Marcelino B. Santos, Arlindo L. Oliveira, João Paulo Teixeira
2006	J	`jnl`	The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Nucleic Acids Res. Miguel C. Teixeira, Pedro T. Monteiro, Pooja Jain, Sandra Tenreiro, Alexandra R. Fernandes, Nuno P. Mira, Marta Alenquer, Ana T. Freitas, Arlindo L. Oliveira, Isabel Sá-Correia
2005	C	`conf`	A Linear Time Biclustering Algorithm for Time Series Gene Expression Data. WABI Sara C. Madeira, Arlindo L. Oliveira
2005	B	`conf`	A highly scalable algorithm for the extraction of CIS-regulatory regions. APBC Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot
2005	B	`conf`	An Efficient Algorithm for Generating Super Condensed Neighborhoods. CPM Luís M. S. Russo, Arlindo L. Oliveira
2005	C	`conf`	Faster Generation of Super Condensed Neighbourhoods Using Finite Automata. SPIRE Luís M. S. Russo, Arlindo L. Oliveira
2005	J	`jnl`	Inference of regular languages using state merging algorithms with search. Pattern Recognit. Miguel M. F. Bugalho, Arlindo L. Oliveira
2005	Misc	`conf`	Using a More Powerful Teacher to Reduce the Number of Queries of the L* Algorithm in Practical Applications. EPIA André L. Martins, Helena Sofia Pinto, Arlindo L. Oliveira
2004	—	`conf`	A New Quick Point Location Algorithm. ER (Workshops) José Poveda, Michael Gould, Arlindo L. Oliveira
2004	A	`conf`	A Probabilistic Method for the Computation of Testability of RTL Constructs. DATE José M. Fernandes, Marcelino B. Santos, Arlindo L. Oliveira, João Paulo Teixeira
2004	Misc	`conf`	A parallel algorithm for the extraction of structured motifs. SAC Alexandra M. Carvalho, Arlindo L. Oliveira, Ana T. Freitas, Marie-France Sagot
2004	J	`jnl`	Biclustering Algorithms for Biological Data Analysis: A Survey. IEEE ACM Trans. Comput. Biol. Bioinform. Sara C. Madeira, Arlindo L. Oliveira
2004	—	`conf`	Constraint Relaxations for Discovering Unknown Sequential Patterns. KDID Cláudia Antunes, Arlindo L. Oliveira
2004	C	`conf`	Efficient Extraction of Structured Motifs Using Box-Links. SPIRE Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot
2004	J	`jnl`	Special issue on string processing and information retrieval. J. Discrete Algorithms Alberto H. F. Laender, Arlindo L. Oliveira
2003	Misc	`conf`	A Data Mining Approach to Credit Risk Evaluation and Behaviour Scoring. EPIA Sara C. Madeira, Arlindo L. Oliveira, Catarina S. Conceição
2003	C	`conf`	An Empirical Comparison of Text Categorization Methods. SPIRE Ana Cardoso-Cachopo, Arlindo L. Oliveira
2003	A	`conf`	Analog Macromodeling using Kernel Methods. ICCAD Joel R. Phillips, João Afonso, Arlindo L. Oliveira, Luís Miguel Silveira
2003	—	`conf`	Generalization of Pattern-Growth Methods for Sequential Pattern Mining with Gap Constraints. MLDM Cláudia Antunes, Arlindo L. Oliveira
2003	A	`conf`	Implicit Resolution of the Chapman-Kolmogorov Equations for Sequential Circuits: An Application in Power Estimation. DATE Ana T. Freitas, Arlindo L. Oliveira
2003	Misc	`conf`	Metrics for Grid Applicability: A Distributed Elliptic Curve Platform Assessment. PPAM Paulo Trezentos, Arlindo L. Oliveira
2003	J	`jnl`	On the problem of gate assignment under different rise and fall delays. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. Arlindo L. Oliveira, Rajeev Murgai
2003	C	`ed.`	String Processing and Information Retrieval, 10th International Symposium, SPIRE 2003, Manaus, Brazil, October 8-10, 2003, Proceedings SPIRE Mario A. Nascimento, Edleno Silva de Moura, Arlindo L. Oliveira
2002	J	`jnl`	Implicit FSM decomposition applied to low-power design. IEEE Trans. Very Large Scale Integr. Syst. José C. Monteiro, Arlindo L. Oliveira
2002	—	`conf`	Inference of Sequential Association Rules Guided by Context-Free Grammars. ICGI Cláudia Antunes, Arlindo L. Oliveira
2002	C	`ed.`	String Processing and Information Retrieval, 9th International Symposium, SPIRE 2002, Lisbon, Portugal, September 11-13, 2002, Proceedings SPIRE Alberto H. F. Laender, Arlindo L. Oliveira
2001	—	`conf`	Circuit partitioning techniques for power estimation using the full set of input correlations. ICECS Ana T. Freitas, Arlindo L. Oliveira
2001	J	`jnl`	Efficient Algorithms for the Inference of Minimum Size DFAs. Mach. Learn. Arlindo L. Oliveira, João P. Marques Silva
2001	J	`jnl`	Techniques for the creation of digital watermarks in sequentialcircuit designs. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. Arlindo L. Oliveira
2000	A	`conf`	An Exact Gate Assignment Algorithm for Tree Circuits Under Rise and Fall Delays. ICCAD Arlindo L. Oliveira, Rajeev Murgai
2000	—	`conf`	FSM decomposition by direct circuit manipulation applied to low power design. ASP-DAC José C. Monteiro, Arlindo L. Oliveira
2000	—	`ed.`	Grammatical Inference: Algorithms and Applications, 5th International Colloquium, ICGI 2000, Lisbon, Portugal, September 11-13, 2000, Proceedings ICGI Arlindo L. Oliveira
1999	J	`jnl`	A new algorithm for exact reduction of incompletely specified finite state machines. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. Jorge M. Pena, Arlindo L. Oliveira
1999	—	`conf`	Integrating Dynamic Power Management in the Design Flow. VLSI Antônio Mota, Nuno Ferreira, Arlindo L. Oliveira, José Monteiro
1999	A*	`conf`	Robust Techniques for Watermarking Sequential Circuit Designs. DAC Arlindo L. Oliveira
1998	A	`conf`	A new algorithm for the reduction of incompletely specified finite state machines. ICCAD Jorge M. Pena, Arlindo L. Oliveira
1998	C	`conf`	Efficient Search Techniques for the Inference of Minimum Size Finite Automata. SPIRE Arlindo L. Oliveira, João P. Marques Silva
1998	J	`jnl`	Exact Minimization of Binary Decision Diagrams Using Implicit Techniques. IEEE Trans. Computers Arlindo L. Oliveira, Luca P. Carloni, Tiziano Villa, Alberto L. Sangiovanni-Vincentelli
1998	A*	`conf`	Finite State Machine Decomposition For Low Power. DAC José C. Monteiro, Arlindo L. Oliveira
1998	A*	`conf`	Using Complementation and Resequencing to Minimize Transitions. DAC Rajeev Murgai, Masahiro Fujita, Arlindo L. Oliveira
1997	B	`conf`	Prime Implicant Computation Using Satisfiability Algorithms. ICTAI Vasco M. Manquinho, Paulo F. Flores, João P. Marques Silva, Arlindo L. Oliveira
1996	B	`conf`	Limits of Exact Algorithms For Inference of Minimum Size Finite State Machines. ALT Arlindo L. Oliveira, Stephen Edwards
1996	J	`jnl`	Using the Minimum Description Length Principle to Infer Reduced Ordered Decision Graphs. Mach. Learn. Arlindo L. Oliveira, Alberto L. Sangiovanni-Vincentelli
1995	A*	`conf`	Inferring Reduced Ordered Decision Graphs of Minimum Description Length. ICML Arlindo L. Oliveira, Alberto L. Sangiovanni-Vincentelli
1993	—	`conf`	Learning Complex Boolean Functions: Algorithms and Applications. NIPS Arlindo L. Oliveira, Alberto L. Sangiovanni-Vincentelli
1992	—	`conf`	Constructive Induction Using a Non-Greedy Strategy for Feature Selection. ML Arlindo L. Oliveira, Alberto L. Sangiovanni-Vincentelli
1991	A	`conf`	LSAT-An Algorithm for the Synthesis of Two Level Threshold Gate Networks. ICCAD Arlindo L. Oliveira, Alberto L. Sangiovanni-Vincentelli
1991	—	`conf`	Learning Concepts by Synthesizing Minimal Threshold Gate Networks. ML Arlindo L. Oliveira, Alberto L. Sangiovanni-Vincentelli