Anália Lourenço

71 papers B 1C 3Misc 14Journal 43Unranked 10

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	A multilayered graph-based framework to explore behavioural phenomena in social media conversations. Int. J. Medical Informatics Guillermo Blanco, Anália Lourenço
2023	J	`jnl`	Spanish Corpora of tweets about COVID-19 vaccination for automatic stance detection. Inf. Process. Manag. Rubén Yáñez Martínez, Guillermo Blanco, Anália Lourenço
2022	J	`jnl`	Boosting biomedical document classification through the use of domain entity recognizers and semantic ontologies for document representation: The case of gluten bibliome. Neurocomputing Martín Pérez-Pérez, Tânia Ferreira, Anália Lourenço, Gilberto Igrejas, Florentino Fdez-Riverola
2022	J	`jnl`	Optimism and pessimism analysis using deep learning on COVID-19 related twitter conversations. Inf. Process. Manag. Guillermo Blanco, Anália Lourenço
2021	J	`jnl`	A framework to extract biomedical knowledge from gluten-related tweets: The case of dietary concerns in digital era. Artif. Intell. Medicine Martín Pérez-Pérez, Gilberto Igrejas, Florentino Fdez-Riverola, Anália Lourenço
2021	J	`jnl`	Computational Approach to the Systematic Prediction of Glycolytic Abilities: Looking Into Human Microbiota. IEEE ACM Trans. Comput. Biol. Bioinform. Guillermo Blanco, Borja Sánchez, Lorena Ruiz, Florentino Fdez-Riverola, Abelardo Margolles, Anália Lourenço
2021	J	`jnl`	Computational resources and strategies to assess single-molecule dynamics of the translation process in S. cerevisiae. Briefings Bioinform. Beatriz T. Magalhães, Anália Lourenço, Nuno F. Azevedo
2021	J	`jnl`	HaemoKBS: A knowledge-based system for real-time, continuous categorisation of adverse reactions in blood recipients. Neurocomputing Augusto Ramoa, Jorge Condeço, Florentino Fdez-Riverola, Anália Lourenço
2020	Misc	`conf`	A Health-Related Study from Food Online Reviews. The Case of Gluten-Free Foods. PACBB Martín Pérez-Pérez, Anália Lourenço, Gilberto Igrejas, Florentino Fdez-Riverola
2020	Misc	`conf`	Application of Agent-Based Modelling to Simulate Ribosome Translation. PAAMS Gael Pérez Rodríguez, Beatriz T. Magalhães, Nuno F. Azevedo, Anália Lourenço
2020	J	`jnl`	Mining the sociome for Health Informatics: Analysis of therapeutic lifestyle adherence of diabetic patients in Twitter. Future Gener. Comput. Syst. Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço
2020	Misc	`conf`	The Activity of Bioinformatics Developers and Users in Stack Overflow. PACBB Roi Pérez-López, Guillermo Blanco, Florentino Fdez-Riverola, Anália Lourenço
2020	J	`jnl`	Understanding the social evolution of the Java community in Stack Overflow: A 10-year study of developer interactions. Future Gener. Comput. Syst. Guillermo Blanco, Roi Pérez-López, Florentino Fdez-Riverola, Anália Lourenço
2019	J	`jnl`	Application of agent-based modelling to assess single-molecule transport across the cell envelope of Comput. Biol. Medicine Paulo Maia, Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço, Nuno F. Azevedo
2019	J	`jnl`	Computational prediction of the bioactivity potential of proteomes based on expert knowledge. J. Biomed. Informatics Aitor Blanco-Míguez, Guillermo Blanco, Alberto Gutiérrez-Jácome, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2019	J	`jnl`	DEWE: A novel tool for executing differential expression RNA-Seq workflows in biomedical research. Comput. Biol. Medicine Hugo López-Fernández, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2019	J	`jnl`	Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm. J. Cheminformatics Martín Pérez-Pérez, Gael Pérez Rodríguez, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Alfonso Valencia, Martin Krallinger, Anália Lourenço
2019	J	`jnl`	Online visibility of software-related web sites: The case of biomedical text mining tools. Inf. Process. Manag. Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço
2019	J	`jnl`	Resources and tools for the high-throughput, multi-omic study of intestinal microbiota. Briefings Bioinform. Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2017	J	`jnl`	Collaborative relation annotation and quality analysis in Markyt environment. Database J. Biol. Databases Curation Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Anália Lourenço
2017	J	`jnl`	MAHMI database: a comprehensive MetaHit-based resource for the study of the mechanism of action of the human microbiota. Database J. Biol. Databases Curation Aitor Blanco-Míguez, Alberto Gutiérrez-Jácome, Florentino Fdez-Riverola, Anália Lourenço, Borja Sánchez
2017	J	`jnl`	P4P: a peptidome-based strain-level genome comparison web tool. Nucleic Acids Res. Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Borja Sánchez
2017	—	`conf`	The Biomedical Abbreviation Recognition and Resolution (BARR) Track: Benchmarking, Evaluation and Importance of Abbreviation Recognition Systems Applied to Spanish Biomedical Abstracts. IberEval@SEPLN Ander Intxaurrondo, Martín Pérez-Pérez, Gael Pérez Rodríguez, Jose Antonio López-Martín, Jesus Santamaría, Santiago de la Peña, Marta Villegas, Saber Ahmad Akhondi, Alfonso Valencia, Anália Lourenço, Martin Krallinger
2016	J	`jnl`	BIOMedical Search Engine Framework: Lightweight and customized implementation of domain-specific biomedical search engines. Comput. Methods Programs Biomed. Alberto G. Jácome, Florentino Fdez-Riverola, Anália Lourenço
2016	J	`jnl`	Computational resources and strategies to construct single-molecule metabolic models of microbial cells. Briefings Bioinform. Denise Gameiro, Martín Pérez-Pérez, Gael Pérez Rodríguez, Gonçalo Monteiro, Nuno F. Azevedo, Anália Lourenço
2016	J	`jnl`	Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow. Database J. Biol. Databases Curation Paula Jorge, Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Maria Olívia Pereira, Anália Lourenço
2016	J	`jnl`	Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets. PLoS Comput. Biol. Aitor Blanco-Míguez, Jan P. Meier-Kolthoff, Alberto Gutiérrez-Jácome, Markus Göker, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2016	J	`jnl`	The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge. Database J. Biol. Databases Curation Martín Pérez-Pérez, Gael Pérez Rodríguez, Obdulia Rabal, Miguel Vazquez, Julen Oyarzabal, Florentino Fdez-Riverola, Alfonso Valencia, Martin Krallinger, Anália Lourenço
2015	Misc	`conf`	A Novel Search Engine Supporting Specific Drug Queries and Literature Management. PACBB Alberto G. Jácome, Florentino Fdez-Riverola, Anália Lourenço
2015	J	`jnl`	Enabling systematic, harmonised and large-scale biofilms data computation: The Biofilms Experiment Workbench. Comput. Methods Programs Biomed. Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
2015	J	`jnl`	Marky: A tool supporting annotation consistency in multi-user and iterative document annotation projects. Comput. Methods Programs Biomed. Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
2015	J	`jnl`	MorphoCol: An ontology-based knowledgebase for the characterisation of clinically significant bacterial colony morphologies. J. Biomed. Informatics Ana Margarida Sousa, Maria Olívia Pereira, Anália Lourenço
2015	J	`jnl`	Pathogenicity phenomena in three model systems: from network mining to emerging system-level properties. Briefings Bioinform. Nadine Castelhano Santos, Maria Olívia Pereira, Anália Lourenço
2014	J	`jnl`	An harmonised vocabulary for communicating and interchanging Biofilms experimental results. J. Integr. Bioinform. Ana Margarida Sousa, Maria Olívia Pereira, Nuno F. Azevedo, Anália Lourenço
2014	Misc	`conf`	BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data. PACBB Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
2014	Misc	`conf`	Bringing Named Entity Recognition on Drupal Content Management System. PACBB José Ferrnandes, Anália Lourenço
2014	Misc	`conf`	Designing an Ontology Tool for the Unification of Biofilms Data. PACBB Ana Margarida Sousa, Maria Olívia Pereira, Nuno F. Azevedo, Anália Lourenço
2014	J	`jnl`	Extraction of Pharmacokinetic Evidence of Drug-drug Interactions from the Literature. CoRR Artemy Kolchinsky, Anália Lourenço, Heng-Yi Wu, Lang Li, Luis M. Rocha
2014	Misc	`conf`	Marky: A Lightweight Web Tracking Tool for Document Annotation. PACBB Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
2014	Misc	`conf`	Networking the Way towards Antimicrobial Combination Therapies. PACBB Paula Jorge, Maria Olívia Pereira, Anália Lourenço
2014	J	`jnl`	Web scraping technologies in an API world. Briefings Bioinform. Daniel Glez-Peña, Anália Lourenço, Hugo López-Fernández, Miguel Reboiro-Jato, Florentino Fdez-Riverola
2013	C	`conf`	Evaluating Web Site Structure Based on Navigation Profiles and Site Topology. WorldCIST Alberto Simões, Anália Lourenço, José João Almeida
2013	Misc	`conf`	Evaluation of Linear Classifiers on Articles Containing Pharmacokinetic Evidence of Drug-Drug Interactions. Pacific Symposium on Biocomputing Artemy Kolchinsky, Anália Lourenço, Lang Li, Luis M. Rocha
2012	J	`jnl`	A Rational Framework for Production Decision Making in Blood Establishments. J. Integr. Bioinform. Augusto Ramoa, Salomé Maia, Anália Lourenço
2012	Misc	`conf`	A Systematic Approach to the Interrogation and Sharing of Standardised Biofilm Signatures. PACBB Anália Lourenço, Andreia Ferreira, Maria Olívia Pereira, Nuno F. Azevedo
2012	J	`jnl`	Computational approaches to standard-compliant biofilm data for reliable analysis and integration. J. Integr. Bioinform. Ana Margarida Sousa, Andreia Ferreira, Nuno F. Azevedo, Maria Olívia Pereira, Anália Lourenço
2012	J	`jnl`	Correction: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature. BMC Bioinform. Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M. Rocha
2012	J	`jnl`	Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions CoRR Artemy Kolchinsky, Anália Lourenço, Lang Li, Luis M. Rocha
2012	Misc	`conf`	MorphoCol: A Powerful Tool for the Clinical Profiling of Pathogenic Bacteria. PACBB Ana Margarida Sousa, Anália Lourenço, Maria Olívia Pereira
2012	Misc	`conf`	SAD_BaSe: A Blood Bank Data Analysis Software. PACBB Augusto Ramoa, Salomé Maia, Anália Lourenço
2012	J	`jnl`	Text mining for the biocuration workflow. Database J. Biol. Databases Curation Lynette Hirschman, Gully A. P. C. Burns, Martin Krallinger, Cecilia N. Arighi, K. Bretonnel Cohen, Alfonso Valencia, Cathy H. Wu, Andrew Chatr-aryamontri, Karen G. Dowell, Eva Huala, Anália Lourenço, Robert S. Nash, Anne-Lise Veuthey, Thomas C. Wiegers, Andrew G. Winter
2011	J	`jnl`	A Linear Classifier Based on Entity Recognition Tools and a Statistical Approach to Method Extraction in the Protein-Protein Interaction Literature CoRR Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M. Rocha
2011	J	`jnl`	A Study of the Short and Long-term Regulation of E. coli Metabolic Pathways. J. Integr. Bioinform. Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
2011	J	`jnl`	A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature. BMC Bioinform. Anália Lourenço, Michael D. Conover, Andrew Wong, Azadeh Nematzadeh, Fengxia Pan, Hagit Shatkay, Luis M. Rocha
2011	J	`jnl`	Challenges in integrating Briefings Bioinform. Anália Lourenço, Sónia Carneiro, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
2011	Misc	`conf`	Interpreting the Regulatory Interplay in PACBB Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
2011	J	`jnl`	Semantic annotation of biological concepts interplaying microbial cellular responses. BMC Bioinform. Rafael Carreira, Sónia Carneiro, Rui Pereira, Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira, Anália Lourenço
2010	J	`jnl`	BioDR: Semantic indexing networks for biomedical document retrieval. Expert Syst. Appl. Anália Lourenço, Rafael Carreira, Daniel Glez-Peña, José Ramón Méndez, Sónia Carneiro, Luis Mateus Rocha, Fernando Díaz, Eugénio C. Ferreira, Isabel Rocha, Florentino Fdez-Riverola, Miguel Rocha
2009	J	`jnl`	@Note: A workbench for Biomedical Text Mining. J. Biomed. Informatics Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
2009	—	`conf`	Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. IWANN (2) Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Rafael Carreira, Luis M. Rocha, Daniel Glez-Peña, José Ramón Méndez, Florentino Fdez-Riverola, Fernando Díaz, Isabel Rocha, Miguel Rocha
2008	C	`conf`	A framework for the development of Biomedical Text Mining software tools. BIBE Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
2008	C	`conf`	A framework for the integrated analysis of metabolic and regulatory networks. BIBE Rui Mendes, Anália Lourenço, Sónia Carneiro, Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira
2008	—	`conf`	Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis. IWPACBB José P. Pinto, Oscar Dias, Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
2006	—	`conf`	Applying Clickstream Data Mining to Real-Time Web Crawler Detection and Containment Using ClickTips Platform. GfKl Anália Lourenço, Orlando Belo
2006	B	`conf`	Catching web crawlers in the act. ICWE Anália Lourenço, Orlando Belo
2004	—	`conf`	Attenuating the Effect of Data Abnormalities on Data Warehouses. ICEIS (1) Anália Lourenço, Orlando Belo
2003	—	`conf`	Assessing Web Usage Profiles. ICWI Anália Lourenço, Orlando Belo
2003	—	`conf`	Utilização de Agentes na Identificação e Resolução de Situações Anómales em Processos de Povoamento de Data Warehouses. JISBD Anália Lourenço, Orlando Belo
2001	—	`conf`	Agent-Based Knowledge Extraction Services Inside Enterprise Data Warehousing Systems Environments. DEXA Workshop Anália Lourenço, Joaquim Gonçalves, Orlando Belo
2001	—	`conf`	Broadband access technologies. Workshop on Universal Accessibility of Ubiquitous Computing Jose Velez, Anália Lourenço, Cristina Pechirra, Leonor Almeida
2001	—	`conf`	Specializing Agents on Data Integration in Data Warehousing System Environment. ICEIS (1) Joaquim Gonçalves, Anália Lourenço, Orlando Belo