Antonio Rosato

31 papers B 1C 1Journal 28Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
Master of Metals2: a graph neural network based architecture for the prediction of zinc binding sites in protein structures.
Briefings Bioinform.
Vincenzo Laveglia, Cosimo Ciofalo, Enrico Morelli, Claudia Andreini, Antonio Rosato
2025 J jnl
Benchmarking Zinc-Binding Site Predictors: A Comparative Analysis of Structure-Based Approaches.
J. Chem. Inf. Model.
Cosimo Ciofalo, Vincenzo Laveglia, Claudia Andreini, Antonio Rosato
2025 J jnl
Correction to "Benchmarking Zinc-Binding Site Predictors: A Comparative Analysis of Structure-Based Approaches".
J. Chem. Inf. Model.
Cosimo Ciofalo, Vincenzo Laveglia, Claudia Andreini, Antonio Rosato
2025 J jnl
Never say never: Optimal exclusion and reserve prices with expectations-based loss-averse buyers.
J. Econ. Theory
Benjamin Balzer, Antonio Rosato
2024 J jnl
Automatic 3D Segmentation and Identification of Anomalous Aortic Origin of the Coronary Arteries Combining Multi-view 2D Convolutional Neural Networks.
J. Imaging Inform. Medicine
Ariel F. Pascaner, Antonio Rosato, Alice Fantazzini, Elena Vincenzi, Curzio Basso, Francesco Secchi, Mauro Lo Rito, Michele Conti
2024 C conf
Experimental validation of a mathematical model for sizing end-of-production-line test benches for electric motors of electric vehicle.
IECON
Emiliano Lustrissimi, Antonio Rosato, Sebastiano Caravaggi, Bonifacio Bianco
2023 J jnl
Hunting down zinc(II)-binding sites in proteins with distance matrices.
Bioinform.
Vincenzo Laveglia, Milana Bazayeva, Claudia Andreini, Antonio Rosato
2022 J jnl
Dutch vs. first-price auctions with expectations-based loss-averse bidders.
J. Econ. Theory
Benjamin Balzer, Antonio Rosato, Jonas von Wangenheim
2022 J jnl
Learning to Identify Physiological and Adventitious Metal-Binding Sites in the Three-Dimensional Structures of Proteins by Following the Hints of a Deep Neural Network.
J. Chem. Inf. Model.
Vincenzo Laveglia, Andrea Giachetti, Davide Sala, Claudia Andreini, Antonio Rosato
2022 J jnl
PDBe-KB: collaboratively defining the biological context of structural data.
Nucleic Acids Res.
Mihaly Varadi, Stephen Anyango, David R. Armstrong, John M. Berrisford, Preeti Choudhary, Mandar S. Deshpande, Nurul Nadzirin, Sreenath Nair, Lukás Pravda, Ahsan Tanweer, Bissan Al-Lazikani, Claudia Andreini, Geoffrey J. Barton, David Bednar, Karel Berka, Tom L. Blundell, Kelly Brock, José María Carazo, Jirí Damborský, Alessia David, Sucharita Dey, Roland L. Dunbrack Jr., Juan Fernández-Recio, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Thomas A. Hopf, David Jakubec, Natarajan Kannan, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Nir London, José Ramón Macías, Mallur Srivatsan Madhusudhan, Debora S. Marks, Lennart Martens, Stuart A McGowan, Jake E. McGreig, Vivek Modi, R. Gonzalo Parra, Gerardo Pepe, Damiano Piovesan, Jaime Prilusky, Valeria Putignano, Leandro G. Radusky, Pathmanaban Ramasamy, Atilio O. Rausch, Nathalie Reuter, Luis A. Rodriguez, Nathan J. Rollins, Antonio Rosato, Pawel Rubach, Luis Serrano, Gulzar Singh, Petr Skoda, Carlos Oscar Sánchez Sorzano, Jan Stourac, Joanna I. Sulkowska, Radka Svobodová Vareková, Natalia Tichshenko, Silvio C. E. Tosatto, Wim F. Vranken, Mark N. Wass, Dandan Xue, Daniel Zaidman, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar
2021 J jnl
Automated Determination of Nuclear Magnetic Resonance Chemical Shift Perturbations in Ligand Screening Experiments: The PICASSO Web Server.
J. Chem. Inf. Model.
Vincenzo Laveglia, Andrea Giachetti, Linda Cerofolini, Kevin Haubrich, Marco Fragai, Alessio Ciulli, Antonio Rosato
2021 J jnl
Expectations-Based Loss Aversion in Auctions with Interdependent Values: Extensive vs. Intensive Risk.
Manag. Sci.
Benjamin Balzer, Antonio Rosato
2021 J jnl
Insights into the Dynamics of the Human Zinc Transporter ZnT8 by MD Simulations.
J. Chem. Inf. Model.
Davide Sala, Andrea Giachetti, Antonio Rosato
2021 J jnl
Structural biology in the clouds: The WeNMR-EOSC Ecosystem.
CoRR
Rodrigo Vargas Honorato, Panagiotis I. Koukos, Brian Jiménez-García, Andrei Tsaregorodtsev, Marco Verlato, Andrea Giachetti, Antonio Rosato, Alexandre M. J. J. Bonvin
2019 J jnl
Loss aversion and competition in Vickrey auctions: Money ain't no good.
Games Econ. Behav.
Antonio Rosato, Agnieszka Tymula
2019 J jnl
Upgrading and Validation of the AMBER Force Field for Histidine and Cysteine Zinc(II)-Binding Residues in Sites with Four Protein Ligands.
J. Chem. Inf. Model.
Marina Macchiagodena, Marco Pagliai, Claudia Andreini, Antonio Rosato, Piero Procacci
2018 J jnl
MetalPDB in 2018: a database of metal sites in biological macromolecular structures.
Nucleic Acids Res.
Valeria Putignano, Antonio Rosato, Lucia Banci, Claudia Andreini
2017 J jnl
Investigation of the Iron(II) Release Mechanism of Human H-Ferritin as a Function of pH.
J. Chem. Inf. Model.
Davide Sala, Silvia Ciambellotti, Andrea Giachetti, Paola Turano, Antonio Rosato
2017 J jnl
The future of metabolomics in ELIXIR.
F1000Research
Merlijn N. van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez Del Angel, Warwick B. Dunn, Timothy M. D. Ebbels, Franck Giacomoni, Alejandra N. González-Beltrán, Thomas Hankemeier, Kenneth Haug, Jose L. Izquierdo-García, Rafael C. Jiménez, Fabien Jourdan, Namrata Kale, Maria I. Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Nicholas K. Moschonas, Steffen Neumann, Claire O'Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M. Salek, Susanna-Assunta Sansone, Venkata P. Satagopam, Daniel Schober, Ruth Shimmo, Rachel A. Spicer, Ola Spjuth, Etienne A. Thévenot, Mark R. Viant, Ralf J. M. Weber, Egon L. Willighagen, Gianluigi Zanetti, Christoph Steinbeck
2016 J jnl
MetalPredator: a web server to predict iron-sulfur cluster binding proteomes.
Bioinform.
Yana Valasatava, Antonio Rosato, Lucia Banci, Claudia Andreini
2013 J jnl
MetalPDB: a database of metal sites in biological macromolecular structures.
Nucleic Acids Res.
Claudia Andreini, Gabriele Cavallaro, Serena Lorenzini, Antonio Rosato
2013 J jnl
MetalS
J. Chem. Inf. Model.
Claudia Andreini, Gabriele Cavallaro, Antonio Rosato, Yana Valasatava
2012 J jnl
RPF: a quality assessment tool for protein NMR structures.
Nucleic Acids Res.
Yuanpeng Janet Huang, Antonio Rosato, Gautam Singh, Gaetano T. Montelione
2012 J jnl
WeNMR: Structural Biology on the Grid.
J. Grid Comput.
Tsjerk A. Wassenaar, Marc van Dijk, Nuno Loureiro-Ferreira, Gijs van der Schot, Sjoerd Jacob de Vries, Christophe Schmitz, Johan van der Zwan, Rolf Boelens, Andrea Giachetti, Lucio Ferella, Antonio Rosato, Ivano Bertini, Torsten Herrmann, Hendrik R. A. Jonker, Anurag Bagaria, Victor Jaravine, Peter Güntert, Harald Schwalbe, Wim F. Vranken, Jurgen F. Doreleijers, Gert Vriend, Geerten W. Vuister, Daniel Franke, Alexey Kikhney, Dmitri I. Svergun, Rasmus H. Fogh, John M. C. Ionides, Ernest D. Laue, Chris A. E. M. Spronk, Simonas Jurksa, Marco Verlato, Simone Badoer, Stefano Dal Pra, Mirco Mazzucato, Eric Frizziero, Alexandre M. J. J. Bonvin
2011 J jnl
A Grid-enabled web portal for NMR structure refinement with AMBER.
Bioinform.
Ivano Bertini, David A. Case, Lucio Ferella, Andrea Giachetti, Antonio Rosato
2011 J jnl
A Simple Protocol for the Comparative Analysis of the Structure and Occurrence of Biochemical Pathways Across Superkingdoms.
J. Chem. Inf. Model.
Claudia Andreini, Ivano Bertini, Gabriele Cavallaro, Leonardo Decaria, Antonio Rosato
2011 — conf
WeNMR: Structural Biology on the Grid.
IWSG-Life
Tsjerk A. Wassenaar, Marc van Dijk, Nuno Loureiro-Ferreira, Gijs van der Schot, Sjoerd Jacob de Vries, Christophe Schmitz, Johan van der Zwan, Rolf Boelens, Andrea Giachetti, Lucio Ferella, Antonio Rosato, Ivano Bertini, Torsten Herrmann, Hendrik R. A. Jonker, Anurag Bagaria, Victor Jaravine, Peter Güntert, Harald Schwalbe, Wim F. Vranken, Jurgen F. Doreleijers, Gert Vriend, Geerten W. Vuister, Daniel Franke, Alexey Kikhney, Dmitri I. Svergun, Rasmus H. Fogh, John M. C. Ionides, Ernest D. Laue, Chris A. E. M. Spronk, Marco Verlato, Simone Badoer, Stefano Dal Pra, Mirco Mazzucato, Eric Frizziero, Alexandre M. J. J. Bonvin
2009 J jnl
Role of the N-Terminal Tail of Metal-Transporting P
J. Chem. Inf. Model.
Shailesh Sharma, Antonio Rosato
2007 J jnl
Predicting zinc binding at the proteome level.
BMC Bioinform.
Andrea Passerini, Claudia Andreini, Sauro Menchetti, Antonio Rosato, Paolo Frasconi
2006 B conf
Improving Prediction of Zinc Binding Sites by Modeling the Linkage Between Residues Close in Sequence.
RECOMB
Sauro Menchetti, Andrea Passerini, Paolo Frasconi, Claudia Andreini, Antonio Rosato
2004 J jnl
A hint to search for metalloproteins in gene banks.
Bioinform.
Claudia Andreini, Ivano Bertini, Antonio Rosato