Anton Crombach

16 papers Journal 12Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
Explaining Random Forest and XGBoost with Shallow Decision Trees by Co-clustering Feature Importance.
Mach. Learn.
Ruggero G. Pensa, Anton Crombach, Sergio Peignier, Christophe Rigotti
2025 — conf
Re_actShap : détection de rebranchements des réseaux de régulation d'expression génique à l'aide des valeurs SHAP.
EGC
Lisa Chabrier, Anton Crombach, Sergio Peignier, Christophe Rigotti
2025 — conf
Three-State Gene Expression Model Parameterized for Single-Cell Multi-omics Data.
CMSB
Thibaut Peyric, Thomas Lepoutre, Anton Crombach, Thomas Guyet
2024 — conf
Combining SHAP-Driven Co-clustering and Shallow Decision Trees to Explain XGBoost.
DS (1)
Ruggero G. Pensa, Anton Crombach, Sergio Peignier, Christophe Rigotti
2024 — conf
Detecting gene regulatory network rewiring as changes in marker regulatory associations using only single-cell gene expression data.
ICDM (Workshops)
Lisa Chabrier, Anton Crombach, Sergio Peignier, Christophe Rigotti
2024 J jnl
Effective Pruning for Top-k Feature Search on the Basis of SHAP Values.
IEEE Access
Lisa Chabrier, Anton Crombach, Sergio Peignier, Christophe Rigotti
2017 J jnl
Dynamic Maternal Gradients Control Timing and Shift-Rates for Drosophila Gap Gene Expression.
PLoS Comput. Biol.
Berta Verd, Anton Crombach, Johannes Jaeger
2017 J jnl
Scatter Search Applied to the Inference of a Development Gene Network.
Comput.
Amir Masoud Abdol, Damjan Cicin-Sain, Jaap A. Kaandorp, Anton Crombach
2015 J jnl
BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology.
BMC Syst. Biol.
Alejandro Fernández Villaverde, David Henriques, Kieran Smallbone, Sophia Bongard, Joachim Schmid, Damjan Cicin-Sain, Anton Crombach, Julio Saez-Rodriguez, Klaus Mauch, Eva Balsa-Canto, Pedro Mendes, Johannes Jaeger, Julio R. Banga
2015 J jnl
SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos.
Nucleic Acids Res.
Damjan Cicin-Sain, Antonio Hermoso Pulido, Anton Crombach, Karl R. Wotton, Eva Jiménez-Guri, Jean-François Taly, Guglielmo Roma, Johannes Jaeger
2014 J jnl
BioPreDyn-bench: benchmark problems for kinetic modelling in systems biology.
CoRR
Alejandro Fernández Villaverde, David Henriques, Kieran Smallbone, Sophia Bongard, Joachim Schmid, Damjan Cicin-Sain, Anton Crombach, Julio Saez-Rodriguez, Klaus Mauch, Eva Balsa-Canto, Pedro Mendes, Johannes Jaeger, Julio R. Banga
2014 J jnl
Classification of transient behaviours in a time-dependent toggle switch model.
BMC Syst. Biol.
Berta Verd, Anton Crombach, Johannes Jaeger
2014 J jnl
Evolution of early development in dipterans: Reverse-engineering the gap gene network in the moth midge Clogmia albipunctata (Psychodidae).
Biosyst.
Anton Crombach, Mónica A. García-Solache, Johannes Jaeger
2012 J jnl
Efficient Reverse-Engineering of a Developmental Gene Regulatory Network.
PLoS Comput. Biol.
Anton Crombach, Karl R. Wotton, Damjan Cicin-Sain, Maksat Ashyraliyev, Johannes Jaeger
2011 J jnl
Is RNA-dependent RNA polymerase essential for transposon control?
BMC Syst. Biol.
Anton Crombach, Paulien Hogeweg
2008 J jnl
Evolution of Evolvability in Gene Regulatory Networks.
PLoS Comput. Biol.
Anton Crombach, Paulien Hogeweg