Anna Gambin

55 papers A* 1A 1B 6C 3Journal 32Unranked 12
YearRankTypeTitle / Venue / Authors
2025 J jnl
Magnetstein: Web application for quantitative NMR mixture analysis.
SoftwareX
Antoni Moszynski, Antoni Goldstein, Barbara Domzal, Michal Startek, Krzysztof Kazimierczuk, Anna Gambin
2023 J jnl
Critical assessment of synthetic accessibility scores in computer-assisted synthesis planning.
J. Cheminformatics
Grzegorz Skoraczynski, Mateusz Kitlas, Blazej Miasojedow, Anna Gambin
2022 J jnl
<tt>TADeus2</tt>: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure.
Nucleic Acids Res.
Barbara Poszewiecka, Victor Murcia Pienkowski, Karol Nowosad, Jérôme D. Robin, Krzysztof Gogolewski, Anna Gambin
2020 J jnl
Knot_pull - python package for biopolymer smoothing and knot detection.
Bioinform.
Aleksandra I. Jarmolinska, Anna Gambin, Joanna I. Sulkowska
2020 J jnl
Low Entropy Sub-Networks Prevent the Integration of Metabolomic and Transcriptomic Data.
Entropy
Krzysztof Gogolewski, Marcin Kostecki, Anna Gambin
2019 J jnl
Jaccard/Tanimoto similarity test and estimation methods for biological presence-absence data.
BMC Bioinform.
Neo Christopher Chung, Blazej Miasojedow, Michal Startek, Anna Gambin
2019 J jnl
Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA Sequencing Data.
J. Comput. Biol.
Krzysztof Gogolewski, Maciej Sykulski, Neo Christopher Chung, Anna Gambin
2018 J jnl
Estimation of Rates of Reactions Triggered by Electron Transfer in Top-Down Mass Spectrometry.
J. Comput. Biol.
Michal Aleksander Ciach, Mateusz Krzysztof Lacki, Blazej Miasojedow, Frederik Lermyte, Dirk Valkenborg, Frank Sobott, Anna Gambin
2018 — conf
PCA-like Methods for the Integration of Single Cell RNA-seq Data with Metabolic Networks.
ICCABS
Krzysztof Gogolewski, Anna Gambin
2018 J jnl
Preface.
Fundam. Informaticae
Anna Gambin, Monika Heiner
2018 — conf
Renal cell carcinoma classification: a case study of pitfalls associated with metabolic landscape analysis.
BIBM
Krzysztof Gogolewski, Marcin Kostecki, Anna Gambin
2018 — conf
TADeus-a tool for clinical interpretation of structural variants modifying chromatin organization.
BIBM
Barbara Poszewiecka, Pawel Stankiewicz, Tomasz Gambin, Anna Gambin
2018 C conf
The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution.
WABI
Szymon Majewski, Michal Aleksander Ciach, Michal Startek, Wanda Niemyska, Blazej Miasojedow, Anna Gambin
2018 — conf
Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq Data.
ISBRA
Krzysztof Gogolewski, Maciej Sykulski, Neo Christopher Chung, Anna Gambin
2017 — conf
Estimation of Rates of Reactions Triggered by Electron Transfer in Top-Down Mass Spectrometry.
ISBRA
Michal Aleksander Ciach, Mateusz Krzysztof Lacki, Blazej Miasojedow, Frederik Lermyte, Dirk Valkenborg, Frank Sobott, Anna Gambin
2017 J jnl
Inferring transposons activity chronology by TRANScendence - TEs database and de-novo mining tool.
BMC Bioinform.
Michal Startek, Jakub Nogly, Agnieszka Gromadka, Dariusz Grzebelus, Anna Gambin
2016 J jnl
Improvement of the
Entropy
Agata Charzynska, Anna Gambin
2015 J jnl
Computational modeling of sphingolipid metabolism.
BMC Syst. Biol.
Weronika Wronowska, Agata Charzynska, Karol Nienaltowski, Anna Gambin
2014 J jnl
StochDecomp - Matlab package for noise decomposition in stochastic biochemical systems.
Bioinform.
Tomasz Jetka, Agata Charzynska, Anna Gambin, Michael P. H. Stumpf, Michal Komorowski
2013 J jnl
Functional performance of aCGH design for clinical cytogenetics.
Comput. Biol. Medicine
Tomasz Gambin, Pawel Stankiewicz, Maciej Sykulski, Anna Gambin
2013 J jnl
Multiple samples aCGH analysis for rare CNVs detection.
J. Clin. Bioinform.
Maciej Sykulski, Tomasz Gambin, Magdalena Bartnik, Katarzyna Derwinska, Barbara Wisniowiecka-Kowalnik, Pawel Stankiewicz, Anna Gambin
2012 J jnl
Alan Turing and Systems Biology.
ERCIM News
Anna Gambin, Anna K. Marciniak-Czochra, Damian Niwinski
2012 J jnl
Inferring serum proteolytic activity from LC-MS/MS data.
BMC Bioinform.
Piotr Dittwald, Jerzy Ostrowski, Jakub Karczmarski, Anna Gambin
2012 J jnl
Preface.
Fundam. Informaticae
Anna Gambin, Anna K. Marciniak-Czochra
2012 J jnl
Tav4SB: integrating tools for analysis of kinetic models of biological systems.
BMC Syst. Biol.
Mikolaj Rybinski, Michal Lula, Pawel Banasik, Slawomir Lasota, Anna Gambin
2011 — conf
Efficient Multiple Samples aCGH Analysis for Rare CNVs Detection.
BIBM
Maciej Sykulski, Tomasz Gambin, Magdalena Bartnik, Katarzyna Derwinska, Barbara Wisniowiecka-Kowalnik, Pawel Stankiewicz, Anna Gambin
2011 — conf
Inferring serum proteolytic activity from LC-MS/MS data.
ICCABS
Piotr Dittwald, Jerzy Ostrowski, Jakub Karczmarski, Anna Gambin
2011 — conf
Robustness of Exon CGH Array Designs.
BIOINFORMATICS
Tomasz Gambin, Pawel Stankiewicz, Maciej Sykulski, Anna Gambin
2011 — conf
Subset Seed Extension to Protein BLAST.
BIOINFORMATICS
Anna Gambin, Slawomir Lasota, Michal Startek, Maciej Sykulski, Laurent Noé, Gregory Kucherov
2010 J jnl
Modeling Proteolysis from Mass Spectrometry Proteomic Data.
Fundam. Informaticae
Anna Gambin, Boguslaw Kluge
2010 J jnl
Preface.
Fundam. Informaticae
Anna Gambin, Damian Niwinski, Pawel Urzyczyn
2009 J jnl
Classification of peptide mass fingerprint data by novel no-regret boosting method.
Comput. Biol. Medicine
Anna Gambin, Ewa Szczurek, Janusz Dutkowski, Magda Bakun, Michal Dadlez
2009 J jnl
Modeling Exopeptidase Activity from LC-MS Data.
J. Comput. Biol.
Boguslaw Kluge, Anna Gambin, Wojciech Niemiro
2009 J jnl
On Subset Seeds for Protein Alignment.
IEEE ACM Trans. Comput. Biol. Bioinform.
Mikhail A. Roytberg, Anna Gambin, Laurent Noé, Slawomir Lasota, Eugenia Furletova, Ewa Szczurek, Gregory Kucherov
2008 J jnl
Aggregation Algorithms for Perturbed Markov Chains with Applications to Networks Modeling.
SIAM J. Sci. Comput.
Anna Gambin, Piotr Krzyzanowski, Piotr Pokarowski
2008 — conf
Efficient Seeding Techniques for Protein Similarity Search.
BIRD
Mikhail A. Roytberg, Anna Gambin, Laurent Noé, Slawomir Lasota, Eugenia Furletova, Ewa Szczurek, Gregory Kucherov
2007 J jnl
CTX-BLAST: context sensitive version of protein BLAST.
Bioinform.
Anna Gambin, Piotr Wojtalewicz
2007 J jnl
New Metrics for Phylogenies.
Fundam. Informaticae
Lukasz Bolikowski, Anna Gambin
2007 — conf
No-Regret Boosting.
ICANNGA (1)
Anna Gambin, Ewa Szczurek
2007 J jnl
On consensus biomarker selection.
BMC Bioinform.
Janusz Dutkowski, Anna Gambin
2006 J jnl
Alignment with Context Dependent Scoring Function.
J. Comput. Biol.
Anna Gambin, Jerzy Tiuryn, Jerzy Tyszkiewicz
2006 J jnl
Analyzing Stationary States of Gene Regulatory Network Using Petri Nets.
Silico Biol.
Anna Gambin, Slawomir Lasota, Michai Rutkowski
2006 J jnl
Applying dynamic Bayesian networks to perturbed gene expression data.
BMC Bioinform.
Norbert Dojer, Anna Gambin, Andrzej Mizera, Bartek Wilczynski, Jerzy Tiuryn
2006 C conf
Efficient Model-Based Clustering for LC-MS Data.
WABI
Marta Luksza, Boguslaw Kluge, Jerzy Ostrowski, Jakub Karczmarski, Anna Gambin
2005 — conf
Almost FPRAS for Lattice Models of Protein Folding.
WEA
Anna Gambin, Damian Wójtowicz
2002 C conf
Contextual alignment of biological sequences.
ECCB
Anna Gambin, Slawomir Lasota, Radoslaw Szklarczyk, Jerzy Tiuryn, Jerzy Tyszkiewicz
2001 B conf
A Combinatorial Aggregation Algorithm for Stationary Distribution of a Large Markov Chain.
FCT
Anna Gambin, Piotr Pokarowski
2001 B conf
A New Combinatorial Algorithm for Large Markov Chains (Extended Abstract).
CASC
Anna Gambin, Piotr Pokarowski
2001 J jnl
On Different Models for Packet Flow in Multistage Interconnection Networks.
Fundam. Informaticae
Martin Dietzfelbinger, Anna Gambin, Slawomir Lasota
1999 B conf
On Approximating the Number of Bases of Exchange Preserving Matroids.
MFCS
Anna Gambin
1999 B conf
Randomized Gossiping by Packets in Faulty Networks.
SOFSEM
Anna Gambin, Adam Malinowski
1998 B conf
Randomized Meldable Priority Queues.
SOFSEM
Anna Gambin, Adam Malinowski
1996 B conf
On the Semantics of Multistage Interconnection Networks.
SOFSEM
Anna Gambin, Slawomir Lasota
1996 A* conf
Shared-Memory Simulations on a Faulty-Memory DMM.
ICALP
Bogdan S. Chlebus, Anna Gambin, Piotr Indyk
1994 A conf
PRAM Computations Resilient to Memory Faults.
ESA
Bogdan S. Chlebus, Anna Gambin, Piotr Indyk