Ann E. Loraine

19 papers Misc 3Journal 12Unranked 4
YearRankTypeTitle / Venue / Authors
2022 J jnl
BioViz Connect: Web Application Linking CyVerse Cloud Resources to Genomic Visualization in the Integrated Genome Browser.
Frontiers Bioinform.
Karthik Raveendran, Nowlan H. Freese, Chaitanya Kintali, Srishti Tiwari, Pawan Bole, Chester Dias, Ann E. Loraine
2022 J jnl
Integrated Genome Browser App Store.
Bioinform.
Sameer Shanbhag, Riddhi Patil, Noor Zahara, Chirag Shetty, Rachel Weidenhammer, Sneha Watharkar, Pranav Tambvekar, Philip P. Badzuh, Chester Dias, Narendra Vankayala, Prutha Kulkarni, Charan Vallapureddy, Shamika Kulkarni, Pooja Nikhare, Nowlan H. Freese, Ann E. Loraine
2016 J jnl
Integrated genome browser: visual analytics platform for genomics.
Bioinform.
Nowlan H. Freese, David C. Norris, Ann E. Loraine
2016 J jnl
ProtAnnot: an App for Integrated Genome Browser to display how alternative splicing and transcription affect proteins.
Bioinform.
Tarun Mall, John Eckstein, David C. Norris, Hiral Vora, Nowlan H. Freese, Ann E. Loraine
2014 J jnl
Comparisons of computational methods for differential alternative splicing detection using RNA-seq in plant systems.
BMC Bioinform.
Ruolin Liu, Ann E. Loraine, Julie A. Dickerson
2009 J jnl
Genoviz Software Development Kit: Java tool kit for building genomics visualization applications.
BMC Bioinform.
Gregg A. Helt, John W. Nicol, Ed Erwin, Eric Blossom, Steven G. Blanchard Jr., Stephen A. Chervitz, Cyrus L. Harmon, Ann E. Loraine
2009 J jnl
The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets.
Bioinform.
John W. Nicol, Gregg A. Helt, Steven G. Blanchard Jr., Archana Raja, Ann E. Loraine
2008 J jnl
Bioinformatics, Genomics, and Proteomics: Getting the Big Picture (Biotechnology in the 21st Century): Ann Finney Batiza.
Briefings Bioinform.
Ann E. Loraine
2008 J jnl
Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient.
BMC Bioinform.
Jianchao Yao, Chunqi Chang, Mari L. Salmi, Yeung Sam Hung, Ann E. Loraine, Stanley J. Roux
2005 — conf
Gene-Ontology-based analysis of gene expression changes in early development of Ceratopteris spores.
CSB Workshops
Ann E. Loraine, Mari L. Salmi, Stephen C. Stout, Stanley J. Roux
2004 — conf
Gene Length and Alternative Transcription in Fruit Fly.
CSB
Boris Budagyan, Ann E. Loraine
2004 Misc conf
The Effects of Alternative Splicing on Transmembrane Proteins in the Mouse Genome.
Pacific Symposium on Biocomputing
Melissa S. Cline, Ron Shigeta, Raymond Wheeler, Michael A. Siani-Rose, David Kulp, Ann E. Loraine
2003 J jnl
Exploring Alternative Transcript Structure in the Humangenome Using Blocks and Interpro.
J. Bioinform. Comput. Biol.
Ann E. Loraine, Gregg A. Helt, Melissa S. Cline, Michael A. Siani-Rose
2003 J jnl
NetAffx: Affymetrix probesets and annotations.
Nucleic Acids Res.
Guoying Liu, Ann E. Loraine, Ron Shigeta, Melissa S. Cline, Jill Cheng, Venu Valmeekam, Shaw Sun, David Kulp, Michael A. Siani-Rose
2002 Misc conf
NetAffx: affymetrix probeset annotations.
SAC
Guoying Liu, Ann E. Loraine, Ron Shigeta, Melissa S. Cline, Jill Cheng, Stephen A. Chervitz, David Kulp, Michael A. Siani-Rose
2002 — conf
Protein-Based Analysis of Alternative Splicing in the Human Genome.
CSB
Ann E. Loraine, Gregg A. Helt, Melissa S. Cline, Michael A. Siani-Rose
2002 Misc conf
Structure-Based Comparison of Four Eukaryotic Genomes.
Pacific Symposium on Biocomputing
Melissa S. Cline, Guoying Liu, Ann E. Loraine, Ron Shigeta, Jill Cheng, Gangwu Mei, David Kulp, Michael A. Siani-Rose
2002 — conf
Visualization Techniques for Genomic Data.
CSB
Ann E. Loraine, Gregg A. Helt
2002 J jnl
Visualizing the genome: techniques for presenting human genome data and annotations.
BMC Bioinform.
Ann E. Loraine, Gregg A. Helt