Anil G. Jegga

30 papers A 1C 1Journal 23Unranked 5
YearRankTypeTitle / Venue / Authors
2022 — conf
GraMDTA: Multimodal Graph Neural Networks for Predicting Drug-Target Associations.
BIBM
Jaswanth K. Yella, Sudhir Ghandikota, Anil G. Jegga
2022 J jnl
MGATRx: Discovering Drug Repositioning Candidates Using Multi-View Graph Attention.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jaswanth K. Yella, Anil G. Jegga
2022 — conf
Multimodal feature learning framework for disease biomarker discovery.
BIBM
Sudhir Ghandikota, Jaswanth K. Yella, Anil G. Jegga
2021 J jnl
Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19.
Patterns
Sudhir Ghandikota, Mihika Sharma, Anil G. Jegga
2020 — conf
A multi-context feature learning approach to identify disease-specific gene neighborhoods.
BCB
Sudhir Ghandikota, Anil G. Jegga
2020 — conf
Triangle-Based Tripartite Graph Clustering.
BIBM
Yizong Cheng, Jaswanth K. Yella, Anil G. Jegga
2014 J jnl
ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context.
Nucleic Acids Res.
Chao Wu, Eric E. Bardes, Anil G. Jegga, Bruce J. Aronow
2013 — conf
A Biclustering Algorithm to Discover Functional Modules from ENCODE ChIP-Seq Data.
ICDM Workshops
Chao Wu, Arjun Bakshi, Bruce J. Aronow, Anil G. Jegga, Raj Bhatnagar
2013 J jnl
Computational drug repositioning through heterogeneous network clustering.
BMC Syst. Biol.
Chao Wu, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga
2013 J jnl
Integrative genomics identifies candidate microRNAs for pathogenesis of experimental biliary atresia.
BMC Syst. Biol.
Kazuhiko Bessho, Kumar Shanmukhappa, Rachel Sheridan, Pranavkumar Shivakumar, Reena Mourya, Stephanie Walters, Vivek Kaimal, Eric Dilbone, Anil G. Jegga, Jorge A. Bezerra
2013 J jnl
Large-scale evaluation of automated clinical note de-identification and its impact on information extraction.
J. Am. Medical Informatics Assoc.
Louise Deléger, Katalin Molnár, Guergana Savova, Fei Xia, Todd Lingren, Qi Li, Keith Marsolo, Anil G. Jegga, Megan Kaiser, Laura Stoutenborough, Imre Solti
2013 J jnl
Mining FDA drug labels for medical conditions.
BMC Medical Informatics Decis. Mak.
Qi Li, Louise Deléger, Todd Lingren, Haijun Zhai, Megan Kaiser, Laura Stoutenborough, Anil G. Jegga, Kevin Bretonnel Cohen, Imre Solti
2012 J jnl
A vertex similarity-based framework to discover and rank orphan disease-related genes.
BMC Syst. Biol.
Cheng Zhu, Akash Kushwaha, Kenneth Berman, Anil G. Jegga
2011 J jnl
Drug repositioning for orphan diseases.
Briefings Bioinform.
Divya Sardana, Cheng Zhu, Minlu Zhang, Ranga Chandra Gudivada, Lun Yang, Anil G. Jegga
2011 J jnl
Exploring Off-Targets and Off-Systems for Adverse Drug Reactions via Chemical-Protein Interactome - Clozapine-Induced Agranulocytosis as a Case Study.
PLoS Comput. Biol.
Lun Yang, Kejian Wang, Jian Chen, Anil G. Jegga, Heng Luo, Leming Shi, Chunling Wan, Xizhi Guo, Shengying Qin, Guang He, Guoyin Feng, Lin He
2010 J jnl
A novel framework for detecting maximally banded matrices in binary data.
Stat. Anal. Data Min.
Faris Alqadah, Raj Bhatnagar, Anil G. Jegga
2010 A conf
Mining Maximally Banded Matrices in Binary Data.
SDM
Faris Alqadah, Raj Bhatnagar, Anil G. Jegga
2010 J jnl
PhenoHM: human-mouse comparative phenome-genome server.
Nucleic Acids Res.
Divya Sardana, Suresh Vasa, Nishanth Vepachedu, Jing Chen, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga
2010 J jnl
ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems.
Nucleic Acids Res.
Vivek Kaimal, Eric E. Bardes, Scott C. Tabar, Anil G. Jegga, Bruce J. Aronow
2009 J jnl
Correction: Disease candidate gene identification and prioritization using protein interaction networks.
BMC Bioinform.
Jing Chen, Bruce J. Aronow, Anil G. Jegga
2009 J jnl
Disease candidate gene identification and prioritization using protein interaction networks.
BMC Bioinform.
Jing Chen, Bruce J. Aronow, Anil G. Jegga
2009 J jnl
Inferring novel disease indications for known drugs by semantically linking drug action and disease mechanism relationships.
BMC Bioinform.
Xiaoyan A. Qu, Ranga Chandra Gudivada, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow
2009 J jnl
Regression based predictor for p53 transactivation.
BMC Bioinform.
Sivakumar Gowrisankar, Anil G. Jegga
2009 J jnl
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization.
Nucleic Acids Res.
Jing Chen, Eric E. Bardes, Bruce J. Aronow, Anil G. Jegga
2008 J jnl
Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledge.
J. Biomed. Informatics
Ranga Chandra Gudivada, Xiaoyan A. Qu, Jing Chen, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow
2007 J jnl
GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs.
Nucleic Acids Res.
Anil G. Jegga, Jing Chen, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Ranga Chandra Gudivada, Sue Kong, Vivek Kaimal, Bruce J. Aronow
2007 C conf
Identifying Functional Binding Motifs of Tumor Protein p53 Using Support Vector Machines.
ICMLA
Amit U. Sinha, Mukta Phatak, Raj Bhatnagar, Anil G. Jegga
2007 J jnl
Improved human disease candidate gene prioritization using mouse phenotype.
BMC Bioinform.
Jing Chen, Huan Xu, Bruce J. Aronow, Anil G. Jegga
2007 J jnl
PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease.
Nucleic Acids Res.
Anil G. Jegga, Sivakumar Gowrisankar, Jing Chen, Bruce J. Aronow
2005 J jnl
CisMols Analyzer: identification of compositionally similar
Nucleic Acids Res.
Anil G. Jegga, Ashima Gupta, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Steven Connolly, Kevin Finley, Bruce J. Aronow