Angel Rubio

24 papers Journal 22Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
GPUmatrix: Seamlessly harness the power of GPU computing in R.
R J.
César Lobato-Fernández, Juan A. Ferrer-Bonsoms, Angel Rubio
2023 J jnl
Precision oncology: a review to assess interpretability in several explainable methods.
Briefings Bioinform.
Marian Gimeno, Katyna Sada del Real, Angel Rubio
2023 J jnl
Quantum Embedding Method for the Simulation of Strongly Correlated Systems on Quantum Computers.
CoRR
Max Rossmannek, Fabijan Pavosevic, Angel Rubio, Ivano Tavernelli
2022 J jnl
Eliminating artificial boundary conditions in time-dependent density functional theory using Fourier contour deformation.
CoRR
Jason Kaye, Alex H. Barnett, Leslie Greengard, Umberto De Giovannini, Angel Rubio
2022 J jnl
On the identifiability of the isoform deconvolution problem: application to select the proper fragment length in an RNA-seq library.
Bioinform.
Juan A. Ferrer-Bonsoms, Xabier Morales, Pegah T. Afshar, Wing Hung Wong, Angel Rubio
2022 J jnl
Rediscover: an R package to identify mutually exclusive mutations.
Bioinform.
Juan A. Ferrer-Bonsoms, Laura Jareno, Angel Rubio
2019 J jnl
Upstream analysis of alternative splicing: a review of computational approaches to predict context-dependent splicing factors.
Briefings Bioinform.
Fernando Carazo, Juan P. Romero, Angel Rubio
2015 J jnl
Code Profiling in R: A Review of Existing Methods and an Introduction to Package GUIProfiler.
R J.
Angel Rubio, Fernando de Villar
2014 J jnl
A survey of the parallel performance and accuracy of Poisson solvers for electronic structure calculations.
J. Comput. Chem.
Pablo García-Risueño, Joseba Alberdi-Rodriguez, Micael J. T. Oliveira, Xavier Andrade, Michael Pippig, Javier Muguerza, Agustin Arruabarrena, Angel Rubio
2014 J jnl
Channel and feature selection for a surface electromyographic pattern recognition task.
Expert Syst. Appl.
Iker Mesa, Angel Rubio, Imanol Tubia, Joaquín de No, Javier Díaz
2014 — conf
Recent Memory and Performance Improvements in Octopus Code.
ICCSA (4)
Joseba Alberdi-Rodriguez, Micael J. T. Oliveira, Pablo García-Risueño, Fernando Nogueira, Javier Muguerza, Agustin Arruabarrena, Angel Rubio
2013 J jnl
Integrating gene and protein expression data with genome-scale metabolic networks to infer functional pathways.
BMC Syst. Biol.
Jon Pey, Kaspar Valgepea, Angel Rubio, John E. Beasley, Francisco J. Planes
2013 J jnl
Joint analysis of miRNA and mRNA expression data.
Briefings Bioinform.
Ander Muniategui, Jon Pey, Francisco J. Planes, Angel Rubio
2013 J jnl
Selection of human tissue-specific elementary flux modes using gene expression data.
Bioinform.
Alberto Rezola, Jon Pey, Luis F. de Figueiredo, Adam Podhorski, Stefan Schuster, Angel Rubio, Francisco J. Planes
2012 J jnl
CalMaTe: a method and software to improve allele-specific copy number of SNP arrays for downstream segmentation.
Bioinform.
Maria Ortiz-Estevez, Ander Aramburu, Henrik Bengtsson, Pierre Neuvial, Angel Rubio
2012 J jnl
Getting DNA copy numbers without control samples.
Algorithms Mol. Biol.
Maria Ortiz-Estevez, Ander Aramburu, Angel Rubio
2012 — conf
Reducing the Number of Channels and Signal-features for an Accurate Classification in an EMG Pattern Recognition Task.
BIOSIGNALS
Iker Mesa, Angel Rubio, Javier Díaz, Jon Legarda, Beatriz Sedano
2011 J jnl
Do elementary flux modes combine linearly at the "atomic" level? Integrating tracer-based metabolomics data and elementary flux modes.
Biosyst.
Jon Pey, Constantinos Theodoropoulos, Alberto Rezola, Angel Rubio, Marta Cascante, Francisco J. Planes
2010 J jnl
ACNE: a summarization method to estimate allele-specific copy numbers for Affymetrix SNP arrays.
Bioinform.
Maria Ortiz-Estevez, Henrik Bengtsson, Angel Rubio
2010 J jnl
Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays.
BMC Bioinform.
Miguel Ángel Antón, Ander Aramburu, Angel Rubio
2009 J jnl
Computing the shortest elementary flux modes in genome-scale metabolic networks.
Bioinform.
Luis F. de Figueiredo, Adam Podhorski, Angel Rubio, Christoph Kaleta, John E. Beasley, Stefan Schuster, Francisco J. Planes
2009 J jnl
FactorY, a bioinformatic resource for genome-wide promoter analysis.
Comput. Biol. Medicine
Elizabeth Guruceaga, Victor Segura, Fernando J. Corrales, Angel Rubio
2005 J jnl
Correlation between Gene Expression and GO Semantic Similarity.
IEEE ACM Trans. Comput. Biol. Bioinform.
José L. Sevilla Campo, Victor Segura, Adam Podhorski, Elizabeth Guruceaga, José M. Mato, Luis A. Martínez-Cruz, Fernando J. Corrales, Angel Rubio
2003 J jnl
GARBAN: genomic analysis and rapid biological annotation of cDNA microarray and proteomic data.
Bioinform.
Luis A. Martínez-Cruz, Angel Rubio, María L. Martínez-Chantar, Alberto Labarga, Isabel Barrio, Adam Podhorski, Victor Segura, José L. Sevilla Campo, Matías A. Avila, José M. Mato