Andriy Fedorov

46 papers A 3B 1C 1Misc 1Journal 18Unranked 22

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Vision Foundation Models for Computed Tomography. CoRR Suraj Pai, Ibrahim Hadzic, Dennis Bontempi, Keno K. Bressem, Benjamin H. Kann, Andriy Fedorov, Raymond H. Mak, Hugo J. W. L. Aerts
2022	J	`jnl`	Highdicom: a Python Library for Standardized Encoding of Image Annotations and Machine Learning Model Outputs in Pathology and Radiology. J. Digit. Imaging Christopher P. Bridge, Chris Gorman, Steven D. Pieper, Sean W. Doyle, Jochen K. Lennerz, Jayashree Kalpathy-Cramer, David A. Clunie, Andriy Fedorov, Markus D. Herrmann
2021	J	`jnl`	Highdicom: A Python library for standardized encoding of image annotations and machine learning model outputs in pathology and radiology. CoRR Christopher P. Bridge, Chris Gorman, Steven D. Pieper, Sean W. Doyle, Jochen K. Lennerz, Jayashree Kalpathy-Cramer, David A. Clunie, Andriy Fedorov, Markus D. Herrmann
2020	J	`jnl`	Open Source Platform for Transperineal In-Bore MRI-Guided Targeted Prostate Biopsy. IEEE Trans. Biomed. Eng. Christian Herz, Kemal Tuncali, Andriy Fedorov, Kyle MacNeil, Peter A. Behringer, Junichi Tokuda, Alireza Mehrtash, Parvin Mousavi, Ron Kikinis, Fiona M. Fennessy, Clare M. Tempany
2019	—	`conf`	Application of open-source computational tools to focal laser ablation of the prostate. Image-Guided Procedures Kyle MacNeil, Aritrick Chatterjee, Clare M. Tempany, Aytekin Oto, Andriy Fedorov
2019	J	`jnl`	Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy. IEEE Trans. Medical Imaging Alireza Mehrtash, Mohsen Ghafoorian, Guillaume Pernelle, Alireza Ziaei, Friso G. Heslinga, Kemal Tuncali, Andriy Fedorov, Ron Kikinis, Clare M. Tempany, William M. Wells III, Purang Abolmaesumi, Tina Kapur
2019	J	`jnl`	ModelHub.AI: Dissemination Platform for Deep Learning Models. CoRR Ahmed Hosny, Michael Schwier, Christoph Berger, Evin Pinar Örnek, Mehmet Turan, Phi V. Tran, Leon Weninger, Fabian Isensee, Klaus H. Maier-Hein, Richard McKinley, Michael T. Lu, Udo Hoffmann, Bjoern H. Menze, Spyridon Bakas, Andriy Fedorov, Hugo J. W. L. Aerts
2019	—	`conf`	Towards Patient-Individual PI-Rads v2 Sector Map: Cnn for Automatic Segmentation of Prostatic Zones From T2-Weighted MRI. ISBI Anneke Meyer, Marko Rak, Daniel Schindele, Simon Blaschke, Martin Schostak, Andriy Fedorov, Christian Hansen
2018	—	`conf`	Automatic high resolution segmentation of the prostate from multi-planar MRI. ISBI Anneke Meyer, Alireza Mehrtash, Marko Rak, Daniel Schindele, Martin Schostak, Clare M. Tempany, Tina Kapur, Purang Abolmaesumi, Andriy Fedorov, Christian Hansen
2017	—	`conf`	Classification of clinical significance of MRI prostate findings using 3D convolutional neural networks. Computer-Aided Diagnosis Alireza Mehrtash, Alireza Sedghi, Mohsen Ghafoorian, Mehdi Taghipour, Clare M. Tempany, William M. Wells III, Tina Kapur, Parvin Mousavi, Purang Abolmaesumi, Andriy Fedorov
2017	—	`conf`	DeepInfer: open-source deep learning deployment toolkit for image-guided therapy. Image-Guided Procedures Alireza Mehrtash, Mehran Pesteie, Jorden Hetherington, Peter A. Behringer, Tina Kapur, William M. Wells III, Robert Rohling, Andriy Fedorov, Purang Abolmaesumi
2017	J	`jnl`	Large scale digital prostate pathology image analysis combining feature extraction and deep neural network. CoRR Naiyun Zhou, Andriy Fedorov, Fiona Fennessy, Ron Kikinis, Yi Gao
2017	—	`conf`	Standardized communications of quantitative image analysis results using DICOM: Establishing interoperability through outreach and community engagement. CRI Andriy Fedorov, Daniel L. Rubin, David A. Clunie, Steve Pieper, Ron Kikinis
2017	—	`conf`	Transfer Learning for Domain Adaptation in MRI: Application in Brain Lesion Segmentation. MICCAI (3) Mohsen Ghafoorian, Alireza Mehrtash, Tina Kapur, Nico Karssemeijer, Elena Marchiori, Mehran Pesteie, Charles R. G. Guttmann, Frank-Erik de Leeuw, Clare M. Tempany, Bram van Ginneken, Andriy Fedorov, Purang Abolmaesumi, Bram Platel, William M. Wells III
2017	J	`jnl`	Transfer Learning for Domain Adaptation in MRI: Application in Brain Lesion Segmentation. CoRR Mohsen Ghafoorian, Alireza Mehrtash, Tina Kapur, Nico Karssemeijer, Elena Marchiori, Mehran Pesteie, Charles R. G. Guttmann, Frank-Erik de Leeuw, Clare M. Tempany, Bram van Ginneken, Andriy Fedorov, Purang Abolmaesumi, Bram Platel, William M. Wells III
2016	J	`jnl`	Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience. Medical Image Anal. Tina Kapur, Steve Pieper, Andriy Fedorov, Jean-Christophe Fillion-Robin, Michael Halle, Lauren O'Donnell, Andras Lasso, Tamas Ungi, Csaba Pinter, Julien Finet, Sonia Pujol, Jagadeesan Jayender, Junichi Tokuda, Isaiah Norton, Raúl San José Estépar, David T. Gering, Hugo J. W. L. Aerts, Marianna Jakab, Nobuhiko Hata, Luiz Ibáñez, Daniel J. Blezek, Jim Miller, Stephen R. Aylward, W. Eric L. Grimson, Gabor Fichtinger, William M. Wells III, William E. Lorensen, William J. Schroeder, Ron Kikinis
2016	B	`conf`	Large Scale Cloud-Based Deformable Registration for Image Guided Therapy. CHASE Shahram Mohrehkesh, Andriy Fedorov, Arun Brahmavar Vishwanatha, Fotis Drakopoulos, Ron Kikinis, Nikos Chrisochoides
2015	J	`jnl`	Multi-slice-to-volume registration for MRI-guided transperineal prostate biopsy. Int. J. Comput. Assist. Radiol. Surg. Helen Xu, Andras Lasso, Andriy Fedorov, Kemal Tuncali, Clare M. Tempany, Gabor Fichtinger
2015	—	`conf`	Open-Source Platform for Prostate Motion Tracking During in-Bore Targeted MRI-Guided Biopsy. CLIP@MICCAI Peter A. Behringer, Christian Herz, Tobias Penzkofer, Kemal Tuncali, Clare M. Tempany, Andriy Fedorov
2015	J	`jnl`	Open-source image registration for MRI-TRUS fusion-guided prostate interventions. Int. J. Comput. Assist. Radiol. Surg. Andriy Fedorov, Siavash Khallaghi, C. Antonio Sánchez, Andras Lasso, Sidney S. Fels, Kemal Tuncali, Emily Neubauer Sugar, Tina Kapur, Chenxi Zhang, William M. Wells III, Paul L. Nguyen, Purang Abolmaesumi, Clare M. Tempany
2014	J	`jnl`	An ITK implementation of a physics-based non-rigid registration method for brain deformation in image-guided neurosurgery. Frontiers Neuroinformatics Yixun Liu, Andriy Kot, Fotis Drakopoulos, Chengjun Yao, Andriy Fedorov, Andinet Enquobahrie, Olivier Clatz, Nikos P. Chrisochoides
2014	J	`jnl`	Application of Tolerance Limits to the Characterization of Image Registration Performance. IEEE Trans. Medical Imaging Andriy Fedorov, William M. Wells III, Ron Kikinis, Clare M. Tempany, Mark G. Vangel
2014	—	`conf`	Workflow assessment of 3T MRI-guided transperineal targeted prostate biopsy using a robotic needle guidance. Image-Guided Procedures Sang-Eun Song, Kemal Tuncali, Junichi Tokuda, Andriy Fedorov, Tobias Penzkofer, Fiona Fennessy, Clare M. Tempany, Kitaro Yoshimitsu, John Magill, Nobuhiko Hata
2013	J	`jnl`	GBM Volumetry using the 3D Slicer Medical Image Computing Platform CoRR Jan Egger, Tina Kapur, Andriy Fedorov, Steve Pieper, James V. Miller, Harini Veeraraghavan, Bernd Freisleben, Alexandra J. Golby, Christopher Nimsky, Ron Kikinis
2013	—	`conf`	Prototype Design and Phantom Evaluation of a Device for Co-registered MRI/TRUS Imaging of the Prostate. CLIP Andriy Fedorov, Sang-Eun Song, Tina Kapur, Robert Owen, Emily Neubauer Sugar, Paul Nguyen, William M. Wells III, Clare M. Tempany
2012	—	`conf`	MRI Confirmed Prostate Tissue Classification with Laplacian Eigenmaps of Ultrasound RF Spectra. MLMI Mehdi Moradi, Christian Wachinger, Andriy Fedorov, William M. Wells III, Tina Kapur, Luciant D. Wolfsberger, Paul Nguyen, Clare M. Tempany
2012	—	`conf`	Selection of Optimal Hyper-Parameters for Estimation of Uncertainty in MRI-TRUS Registration of the Prostate. MICCAI (3) Petter Risholm, Firdaus Janoos, Jennifer Pursley, Andriy Fedorov, Clare M. Tempany, Robert A. Cormack, William M. Wells III
2012	—	`conf`	Two solutions for registration of ultrasound to MRI for image-guided prostate interventions. EMBC Mehdi Moradi, Firdaus Janoos, Andriy Fedorov, Petter Risholm, Tina Kapur, Luciant D. Wolfsberger, Paul L. Nguyen, Clare M. Tempany, William M. Wells III
2011	—	`conf`	Probabilistic non-rigid registration of prostate images: Modeling and quantifying uncertainty. ISBI Petter Risholm, Andriy Fedorov, Jennifer Pursley, Kemal Tuncali, Robert A. Cormack, William M. Wells III
2010	J	`jnl`	Non-Rigid Registration for brain MRI: faster and cheaper. Int. J. Funct. Informatics Pers. Medicine Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chrisochoides
2009	—	`conf`	Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture. BIBM Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chrisochoides
2009	—	`conf`	Towards Exascale Parallel Delaunay Mesh Generation. IMR Nikos Chrisochoides, Andrey N. Chernikov, Andriy Fedorov, Andriy Kot, Leonidas Linardakis, Panagiotis A. Foteinos
2008	J	`jnl`	A quantitative assessment of approaches to mesh generation for surgical simulation. Eng. Comput. Bhautik J. Joshi, Andriy Fedorov, Nikos Chrisochoides, Simon K. Warfield, Sébastien Ourselin
2008	—	`conf`	Evaluation of Brain MRI Alignment with the Robust Hausdorff Distance Measures. ISVC (1) Andriy Fedorov, Eric Billet, Marcel Prastawa, Guido Gerig, Alireza Radmanesh, Simon K. Warfield, Ron Kikinis, Nikos Chrisochoides
2008	—	`conf`	Tetrahedral Mesh Generation for Non-rigid Registration of Brain MRI: Analysis of the Requirements and Evaluation of Solutions. IMR Andriy Fedorov, Nikos Chrisochoides
2008	A	`conf`	Toward improved tumor targeting for image guided neurosurgery with intra-operative parametric search using distributed and grid computing. IPDPS Andriy Fedorov, Nikos Chrisochoides
2007	—	`conf`	Application-Driven Quantitative Assessment of Approaches to Mesh Generation. ISBI Bhautik J. Joshi, Andriy Fedorov, Nikos Chrisochoides, Simon K. Warfield, Sébastien Ourselin
2007	Misc	`conf`	Grid-Enabled Software Environment for Enhanced Dynamic Data-Driven Visualization and Navigation During Image-Guided Neurosurgery. International Conference on Computational Science (1) Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Daniel Goldberg-Zimring, Daniel F. Kacher, Stephen Whalen, Ron Kikinis, Ferenc A. Jolesz, Olivier Clatz, Simon K. Warfield, Peter M. Black, Alexandra J. Golby
2007	J	`jnl`	Non-rigid alignment of pre-operative MRI, fMRI, and DT-MRI with intra-operative MRI for enhanced visualization and navigation in image-guided neurosurgery. NeuroImage Neculai Archip, Olivier Clatz, Stephen Whalen, Daniel F. Kacher, Andriy Fedorov, Andriy Kot, Nikos Chrisochoides, Ferenc A. Jolesz, Alexandra J. Golby, Peter M. Black, Simon K. Warfield
2006	—	`conf`	An evaluation of three approaches to tetrahedral mesh generation for deformable registration of brain MR images. ISBI Andriy Fedorov, Nikos Chrisochoides, Ron Kikinis, Simon K. Warfield
2006	A	`conf`	Imaging and visual analysis - Toward real-time image guided neurosurgery using distributed and grid computing. SC Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter M. Black, Olivier Clatz, Alexandra J. Golby, Ron Kikinis, Simon K. Warfield
2006	—	`conf`	Integration of patient specific modeling and advanced image processing techniques for image-guided neurosurgery. Image-Guided Procedures Neculai Archip, Andriy Fedorov, Bryn Lloyd, Nikos Chrisochoides, Alexandra J. Golby, Peter M. Black, Simon K. Warfield
2006	J	`jnl`	Parallel decoupled terminal-edge bisection method for 3D mesh generation. Eng. Comput. Maria-Cecilia Rivara, Carlo Calderon, Andriy Fedorov, Nikos Chrisochoides
2004	—	`conf`	Communication Support for Dynamic Load Balancing of Irregular Adaptive Applications. ICPP Workshops Andriy Fedorov, Nikos Chrisochoides
2004	C	`conf`	Location management in object-based distributed computing. CLUSTER Andriy Fedorov, Nikos Chrisochoides
2003	A	`conf`	A Case Study of Optimistic Computing on the Grid: Parallel Mesh Generation. IPDPS Nikos Chrisochoides, Andriy Fedorov, Bruce Lowekamp, Marcia Zangrilli, Craig A. Lee