Andrey A. Ptitsyn

18 papers C 1Journal 16Unranked 1
YearRankTypeTitle / Venue / Authors
2015 C conf
Optimization of data-intensive next generation sequencing in high performance computing.
BIBE
Nagarajan Kathiresan, Rashid Al-Ali, Puthen V. Jithesh, Tariq AbuZaid, Ramzi Temanni, Andrey A. Ptitsyn
2014 J jnl
The ctenophore genome and the evolutionary origins of neural systems Open.
Nat.
Leonid L. Moroz, Kevin M. Kocot, Mathew R. Citarella, Sohn Dosung, Tigran P. Norekian, Inna S. Povolotskaya, Anastasia P. Grigorenko, Christopher Dailey, Eugene Berezikov, Katherine M. Buckley, Andrey A. Ptitsyn, Denis A. Reshetov, Krishanu Mukherjee, Tatiana P. Moroz, Yelena Bobkova, Fahong Yu, Vladimir V. Kapitonov, Jerzy Jurka, Yuri V. Bobkov, Joshua J. Swore, David O. Girardo, Alexander Fodor, Fedor Gusev, Rachel Sanford, Rebecca Bruders, Ellen Kittler, Claudia E. Mills, Jonathan P. Rast, Romain Derelle, Victor V. Solovyev, Fyodor A. Kondrashov, Billie J. Swalla, Jonathan V. Sweedler, Evgeny I. Rogaev, Kenneth M. Halanych, Andrea B. Kohn
2012 J jnl
Computational workflow for analysis of gain and loss of genes in distantly related genomes.
BMC Bioinform.
Andrey A. Ptitsyn, Leonid L. Moroz
2010 J jnl
Transformation of metabolism with age and lifestyle in Antarctic seals: a case study of systems biology approach to cross-species microarray experiment.
BMC Syst. Biol.
Andrey A. Ptitsyn, Amber Schlater, Shane Kanatous
2009 J jnl
Computational analysis of gene expression space associated with metastatic cancer.
BMC Bioinform.
Andrey A. Ptitsyn
2008 J jnl
Comprehensive analysis of circadian periodic pattern in plant transcriptome.
BMC Bioinform.
Andrey A. Ptitsyn
2008 J jnl
Systems biology approach to identification of biomarkers for metastatic progression in cancer.
BMC Bioinform.
Andrey A. Ptitsyn, Michael M. Weil, Douglas H. Thamm
2007 J jnl
Analysis of circadian pattern reveals tissue-specific alternative transcription in leptin signaling pathway.
BMC Bioinform.
Andrey A. Ptitsyn, Jeffrey M. Gimble
2007 J jnl
Digital Signal Processing Reveals Circadian Baseline Oscillation in Majority of Mammalian Genes.
PLoS Comput. Biol.
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble
2007 J jnl
Permutation test for periodicity in short time series data.
BMC Bioinform.
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble
2006 J jnl
Circadian Clocks Are Resounding in Peripheral Tissues.
PLoS Comput. Biol.
Andrey A. Ptitsyn, Sanjin Zvonic, Steven A. Conrad, L. Keith Scott, Randall L. Mynatt, Jeffrey M. Gimble
2006 J jnl
Permutation test for periodicity in short time series data.
BMC Bioinform.
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble
2006 J jnl
Proceedings of the Third Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.
BMC Bioinform.
Jonathan D. Wren, Yuriy Gusev, Andrey A. Ptitsyn, Stephen Winters-Hilt
2005 J jnl
CLU: A new algorithm for EST clustering.
BMC Bioinform.
Andrey A. Ptitsyn, Winston Hide
1998 J jnl
A genetic algorithm for designing gene family-specific oligonucleotide sets used for hybridization: the G protein-coupled receptor protein superfamily.
Bioinform.
Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach
1997 — conf
A genetic algorithm for designing gene family specific oligonucleotide sets used for hybridization. The G Protein-coupled receptor Protein superfamily..
German Conference on Bioinformatics
Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach
1995 J jnl
Object-oriented data handler for sequence analysis software development.
Comput. Appl. Biosci.
Andrey A. Ptitsyn, Dmitry A. Grigorovich
1994 J jnl
Data bank homology search algorithm with linear computation complexity.
Comput. Appl. Biosci.
Victor B. Strelets, Andrey A. Ptitsyn, Luciano Milanesi, Hwa A. Lim