Andrew Emili

15 papers B 2Journal 11Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Correction: ToxoNet: A high confidence map of protein-protein interactions in Toxoplasma gondii.
PLoS Comput. Biol.
Lakshmipuram S. Swapna, Grant C. Stevens, Aline Sardinha-Silva, Lucas Zhongming Hu, Verena Brand, Daniel D. Fusca, Cuihong Wan, Xuejian Xiong, Jon P. Boyle, Michael E. Grigg, Andrew Emili, John Parkinson
2024 J jnl
ToxoNet: A high confidence map of protein-protein interactions in Toxoplasma gondii.
PLoS Comput. Biol.
Lakshmipuram S. Swapna, Grant C. Stevens, Aline Sardinha-Silva, Lucas Zhongming Hu, Verena Brand, Daniel D. Fusca, Cuihong Wan, Xuejian Xiong, Jon P. Boyle, Michael E. Grigg, Andrew Emili, John Parkinson
2022 J jnl
Global Landscape of Native Protein Complexes in
Genom. Proteom. Bioinform.
Chen Xu, Bing Wang, Lin Yang, Lucas Zhongming Hu, Lanxing Yi, Yaxuan Wang, Shenglan Chen, Andrew Emili, Cuihong Wan
2015 J jnl
Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in
Bioinform.
James Vlasblom, Khalid Zuberi, Harold Rodriguez, Roland Arnold, Alla Gagarinova, Viktor Deineko, Ashwani Kumar, Elisa Leung, Kamran Rizzolo, Bahram Samanfar, Luke Chang, Sadhna Phanse, Ashkan Golshani, Jack Greenblatt, Walid A. Houry, Andrew Emili, Quaid Morris, Gary D. Bader, Mohan Babu
2013 J jnl
Non-parametric Bayesian approach to post-translational modification refinement of predictions from tandem mass spectrometry.
Bioinform.
Clement Chung, Andrew Emili, Brendan J. Frey
2011 J jnl
Computational refinement of post-translational modifications predicted from tandem mass spectrometry.
Bioinform.
Clement Chung, Jian Liu, Andrew Emili, Brendan J. Frey
2011 J jnl
DAnCER: Disease-Annotated Chromatin Epigenetics Resource.
Nucleic Acids Res.
Andrei L. Turinsky, Brian Turner, Rosanne C. Borja, James A. Gleeson, Michael Heath, Shuye Pu, Thomas Switzer, Dong Dong, Yunchen Gong, Tuan On, Xuejian Xiong, Andrew Emili, Jack Greenblatt, John Parkinson, Zhaolei Zhang, Shoshana J. Wodak
2010 J jnl
Predicting protein functions by relaxation labelling protein interaction network.
BMC Bioinform.
Pingzhao Hu, Hui Jiang, Andrew Emili
2008 J jnl
Bacteriome.org - an integrated protein interaction database for
Nucleic Acids Res.
Chong Su, José M. Peregrín-Alvarez, Gareth Butland, Sadhna Phanse, Vincent Fong, Andrew Emili, John Parkinson
2008 B conf
Constructing Treatment Portfolios Using Affinity Propagation.
RECOMB
Delbert Dueck, Brendan J. Frey, Nebojsa Jojic, Vladimir Jojic, Guri Giaever, Andrew Emili, Gabe Musso, Robert Hegele
2007 B conf
A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements.
RECOMB
Anitha Kannan, Andrew Emili, Brendan J. Frey
2007 J jnl
Difference detection in LC-MS data for protein biomarker discovery.
Bioinform.
Jennifer Listgarten, Radford M. Neal, Sam T. Roweis, Peter Wong, Andrew Emili
2006 J jnl
PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.
BMC Bioinform.
Sylvain Pitre, Frank K. H. A. Dehne, Albert Chan, James Cheetham, Alex Duong, Andrew Emili, Marinella Gebbia, Jack Greenblatt, Matthew Jessulat, Nevan J. Krogan, Xuemei Luo, Ashkan Golshani
2005 — conf
A scalable robotic-based laboratory automation system for medium-sized biotechnology laboratories.
CASE
Peyman Najmabadi, Andrew A. Goldenberg, Andrew Emili
2004 — conf
Multiple Alignment of Continuous Time Series.
NIPS
Jennifer Listgarten, Radford M. Neal, Sam T. Roweis, Andrew Emili