Andrew D. McCulloch

39 papers Misc 1Journal 25Unranked 13

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	A Pediatric Cardiac Shape Atlas: Insights into the Structure of Young Healthy Hearts. FIMH (2) Anna Qi, Chris Kim, Nathan Young, Xiaoyang Yu, Brendan T. Crabb, Eleanor L. Schuchardt, Sanjeet Hegde, Charlène Alice Mauger, Alistair A. Young, Jeffrey H. Omens, Andrew D. McCulloch, Hari K. Narayan
2025	—	`conf`	An Open-Source End-to-End Pipeline for Generating 3D+t Biventricular Meshes from Cardiac Magnetic Resonance Imaging. FIMH (2) Joshua R. Dillon, Charlène Alice Mauger, Debbie Zhao, Yu Deng, Steffen E. Petersen, Andrew D. McCulloch, Alistair A. Young, Martyn P. Nash
2025	J	`jnl`	Neural Implicit Heart Coordinates: 3D cardiac shape reconstruction from sparse segmentations. CoRR Marica Muffoletto, Uxio Hermida, Charlène Alice Mauger, Avan Suinesiaputra, Yiyang Xu, Richard Burns, Lisa R. Pankewitz, Andrew D. McCulloch, Steffen E. Petersen, Daniel Rueckert, Alistair A. Young
2024	J	`jnl`	A universal biventricular coordinate system incorporating valve annuli: Validation in congenital heart disease. Medical Image Anal. Lisa R. Pankewitz, Kristian Gregorius Hustad, Sachin Govil, James C. Perry, Sanjeet Hegde, Renxiang Tang, Jeffrey H. Omens, Alistair A. Young, Andrew D. McCulloch, Hermenegild Arevalo
2024	J	`jnl`	MorphiNet: A Graph Subdivision Network for Adaptive Bi-ventricle Surface Reconstruction. CoRR Yu Deng, Yiyang Xu, Linglong Qian, Charlène Alice Mauger, Anastasia Nasopoulou, Steven Williams, Michelle C. Williams, Steven A. Niederer, David E. Newby, Andrew D. McCulloch, Jeffrey H. Omens, Kuberan Pushparajah, Alistair A. Young
2024	J	`jnl`	NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation. J. Chem. Inf. Model. Andrew M. Stokely, Lane W. Votapka, Marcus T. Hock, Abigail E. Teitgen, James Andrew McCammon, Andrew D. McCulloch, Rommie E. Amaro
2024	J	`jnl`	Successful cardiac resynchronization therapy reduces negative septal work in patient-specific models of dyssynchronous heart failure. PLoS Comput. Biol. Amanda Craine, Adarsh Krishnamurthy, Christopher T. Villongco, Kevin Vincent, David E. Krummen, Sanjiv M. Narayan, Roy C. P. Kerckhoffs, Jeffrey H. Omens, Francisco Contijoch, Andrew D. McCulloch
2022	—	`conf`	An Atlas-Based Analysis of Biventricular Mechanics in Tetralogy of Fallot. STACOM@MICCAI Sachin Govil, Sanjeet Hegde, James C. Perry, Jeffrey H. Omens, Andrew D. McCulloch
2021	J	`jnl`	Computational analysis of cardiac structure and function in congenital heart disease: Translating discoveries to clinical strategies. J. Comput. Sci. Nickolas Forsch, Sachin Govil, James C. Perry, Sanjeet Hegde, Alistair A. Young, Jeffrey H. Omens, Andrew D. McCulloch
2019	J	`jnl`	A demonstration of modularity, reuse, reproducibility, portability and scalability for modeling and simulation of cardiac electrophysiology using Kepler Workflows. PLoS Comput. Biol. Pei-Chi Yang, Shweta Purawat, Pek U. Ieong, Mao-Tsuen Jeng, Kevin R. DeMarco, Igor Vorobyov, Andrew D. McCulloch, Ilkay Altintas, Rommie E. Amaro, Colleen E. Clancy
2019	J	`jnl`	Properties of cardiac conduction in a cell-based computational model. PLoS Comput. Biol. Karoline H. Jæger, Andrew G. Edwards, Andrew D. McCulloch, Aslak Tveito
2018	—	`conf`	An Iterative Diffeomorphic Algorithm for Registration of Subdivision Surfaces: Application to Congenital Heart Disease. EMBC Charlène Alice Mauger, Kathleen Gilbert, Avan Suinesiaputra, Beau Pontre, Jeffrey H. Omens, Andrew D. McCulloch, Alistair A. Young
2017	J	`jnl`	Predictive model identifies key network regulators of cardiomyocyte mechano-signaling. PLoS Comput. Biol. Philip M. Tan, Kyle S. Buchholz, Jeffrey H. Omens, Andrew D. McCulloch, Jeffrey J. Saucerman
2016	J	`jnl`	A Computational Modeling and Simulation Approach to Investigate Mechanisms of Subcellular cAMP Compartmentation. PLoS Comput. Biol. Pei-Chi Yang, Britton W. Boras, Mao-Tsuen Jeng, Steffen S. Docken, Timothy J. Lewis, Andrew D. McCulloch, Robert D. Harvey, Colleen E. Clancy
2016	J	`jnl`	Biomechanics simulations using cubic Hermite meshes with extraordinary nodes for isogeometric cardiac modeling. Comput. Aided Geom. Des. Adarsh Krishnamurthy, Matthew J. Gonzales, Gregory M. Sturgeon, William Paul Segars, Andrew D. McCulloch
2016	J	`jnl`	Cardiac image modelling: Breadth and depth in heart disease. Medical Image Anal. Avan Suinesiaputra, Andrew D. McCulloch, Martyn P. Nash, Beau Pontre, Alistair A. Young
2016	—	`conf`	Improving assessment of congenital heart disease through rapid patient specific modeling. EMBC Kathleen Gilbert, Genevieve Farrar, Brett R. Cowan, Avan Suinesiaputra, Christopher Occleshaw, Beau Pontre, James C. Perry, Sanjeet Hegde, Jeffrey H. Omens, Andrew D. McCulloch, Alistair A. Young
2015	—	`conf`	Creating shape templates for patient specific biventricular modeling in congenital heart disease. EMBC Kathleen Gilbert, Genevieve Farrar, Brett R. Cowan, Avan Suinesiaputra, Christopher Occleshaw, Beau Pontre, James C. Perry, Sanjeet Hegde, Alison L. Marsden, Jeffrey H. Omens, Andrew D. McCulloch, Alistair A. Young
2014	—	`conf`	Left Ventricular Diastolic and Systolic Material Property Estimation from Image Data. STACOM Adarsh Krishnamurthy, Christopher T. Villongco, Amanda Beck, Jeffrey H. Omens, Andrew D. McCulloch
2014	J	`jnl`	MAAMD: a workflow to standardize meta-analyses and comparison of affymetrix microarray data. BMC Bioinform. Zhuohui Gan, Jianwu Wang, Nathan Salomonis, Jennifer C. Stowe, Gabriel G. Haddad, Andrew D. McCulloch, Ilkay Altintas, Alexander C. Zambon
2014	Misc	`conf`	Using Kepler for Tool Integration in Microarray Analysis Workflows. ICCS Zhuohui Gan, Jennifer C. Stowe, Ilkay Altintas, Andrew D. McCulloch, Alexander C. Zambon
2013	J	`jnl`	A three-dimensional finite element model of human atrial anatomy: New methods for cubic Hermite meshes with extraordinary vertices. Medical Image Anal. Matthew J. Gonzales, Gregory M. Sturgeon, Adarsh Krishnamurthy, Johan Hake, René Jonas, Paul Stark, Wouter-Jan Rappel, Sanjiv M. Narayan, Yongjie Zhang, William Paul Segars, Andrew D. McCulloch
2013	J	`jnl`	Patient-specific models of cardiac biomechanics. J. Comput. Phys. Adarsh Krishnamurthy, Christopher T. Villongco, Joyce Chuang, Lawrence R. Frank, Vishal Nigam, Ernest Belezzuoli, Paul Stark, David E. Krummen, Sanjiv M. Narayan, Jeffrey H. Omens, Andrew D. McCulloch, Roy Kerckhoffs
2012	J	`jnl`	An atlas-based geometry pipeline for cardiac Hermite model construction and diffusion tensor reorientation. Medical Image Anal. Yongjie Zhang, Xinghua Liang, Jun Ma, Yiming Jing, Matthew J. Gonzales, Christopher T. Villongco, Adarsh Krishnamurthy, Lawrence R. Frank, Vishal Nigam, Paul Stark, Sanjiv M. Narayan, Andrew D. McCulloch
2012	—	`conf`	GPU acceleration of optical mapping algorithm for cardiac electrophysiology. EMBC Pingfan Meng, Ali Irturk, Ryan Kastner, Andrew D. McCulloch, Jeffrey H. Omens, Adam Wright
2012	—	`conf`	MAAMD: A Workflow to Standardize Meta-Analyses of Affymetrix Microarray Data. HISB Zhuohui Gan, Jianwu Wang, Nathan Salomonis, Ilkay Altintas, Andrew D. McCulloch, Alexander C. Zambon
2010	J	`jnl`	Numerical Analysis of Ca PLoS Comput. Biol. Yuhui Cheng, Zeyun Yu, Masahiko Hoshijima, Michael J. Holst, Andrew D. McCulloch, James Andrew McCammon, Anushka Michailova
2010	—	`conf`	Source-to-Source Optimization of CUDA C for GPU Accelerated Cardiac Cell Modeling. Euro-Par (1) Fred V. Lionetti, Andrew D. McCulloch, Scott B. Baden
2009	J	`jnl`	Effects of biventricular pacing and scar size in a computational model of the failing heart with left bundle branch block. Medical Image Anal. Roy Kerckhoffs, Andrew D. McCulloch, Jeffrey H. Omens, Lawrence J. Mulligan
2009	J	`jnl`	Metabolism as means for hypoxia adaptation: metabolic profiling and flux balance analysis. BMC Syst. Biol. Jacob D. Feala, Laurence Coquin, Dan Zhou, Gabriel G. Haddad, Giovanni Paternostro, Andrew D. McCulloch
2008	J	`jnl`	Search Algorithms as a Framework for the Optimization of Drug Combinations. PLoS Comput. Biol. Diego Calzolari, Stefania Bruschi, Laurence Coquin, Jennifer Schofield, Jacob D. Feala, John C. Reed, Andrew D. McCulloch, Giovanni Paternostro
2007	—	`conf`	Effect of Pacing Site and Infarct Location on Regional Mechanics and Global Hemodynamics in a Model Based Study of Heart Failure. FIMH Roy Kerckhoffs, Andrew D. McCulloch, Jeffrey H. Omens, Lawrence J. Mulligan
2006	J	`jnl`	Computational Methods for Cardiac Electromechanics. Proc. IEEE Roy C. P. Kerckhoffs, Sarah N. Healy, Taras P. Usyk, Andrew D. McCulloch
2006	J	`jnl`	Multiscale Modeling: Physiome Project Standards, Tools, and Databases. Computer Peter J. Hunter, Wilfred W. Li, Andrew D. McCulloch, Denis Noble
2005	J	`jnl`	A more efficient search strategy for aging genes based on connectivity. Bioinform. Luca Ferrarini, Luca Bertelli, Jacob D. Feala, Andrew D. McCulloch, Giovanni Paternostro
2002	—	`conf`	Static Data Structures. Generic Programming Michael C. Burton, William G. Griswold, Andrew D. McCulloch, Gary A. Huber
2001	—	`conf`	Experimental and Computational Modeling of Cardiac Electromechanical Coupling. FIMH Andrew D. McCulloch, Derrick Sung, Mary Ellen Thomas, Anushka Michailova
2001	J	`jnl`	In vivo finite element model-based image analysis of pacemaker lead mechanics. Medical Image Anal. Walt W. Baxter, Andrew D. McCulloch
1994	J	`jnl`	A collocation-Galerkin finite element model of cardiac action potential propagation. IEEE Trans. Biomed. Eng. Jack M. Rogers, Andrew D. McCulloch