Andrew D. Ellington

19 papers A* 1B 1C 1Misc 1Journal 9Unranked 6
YearRankTypeTitle / Venue / Authors
2023 A* conf
HotProtein: A Novel Framework for Protein Thermostability Prediction and Editing.
ICLR
Tianlong Chen, Chengyue Gong, Daniel Jesus Diaz, Xuxi Chen, Jordan Tyler Wells, Qiang Liu, Zhangyang Wang, Andrew D. Ellington, Alex Dimakis, Adam R. Klivans
2023 J jnl
Mining Patents with Large Language Models Demonstrates Congruence of Functional Labels and Chemical Structures.
CoRR
Clayton W. Kosonocky, Claus O. Wilke, Edward M. Marcotte, Andrew D. Ellington
2023 J jnl
Prompt Engineering for Transformer-based Chemical Similarity Search Identifies Structurally Distinct Functional Analogues.
CoRR
Clayton W. Kosonocky, Aaron L. Feller, Claus O. Wilke, Andrew D. Ellington
2023 J jnl
Using alternative SMILES representations to identify novel functional analogues in chemical similarity vector searches.
Patterns
Clayton W. Kosonocky, Aaron L. Feller, Claus O. Wilke, Andrew D. Ellington
2019 J jnl
Aptamers in Education: Undergraduates Make Aptamers and Acquire 21st Century Skills Along the Way.
Sensors
Gwendolyn M. Stovall, Vincent Huynh, Shelly Engelman, Andrew D. Ellington
2017 B conf
The Design Space of Strand Displacement Cascades with Toehold-Size Clamps.
DNA
Boya Wang, Chris Thachuk, Andrew D. Ellington, David Soloveichik
2014 J jnl
Modeling scalable pattern generation in DNA reaction networks.
Nat. Comput.
Peter B. Allen, Xi Chen, Zack B. Simpson, Andrew D. Ellington
2012 — conf
A fully-electronic charge-based DNA sequencing CMOS biochip.
VLSIC
Arun Manickam, Rituraj Singh, Nicholas Wood, Bingling Li, Andrew D. Ellington, Arjang Hassibi
2012 C conf
Modeling Scalable Pattern Generation in DNA Reaction Networks.
ALIFE
Peter B. Allen, Xi Chen, Zack B. Simpson, Andrew D. Ellington
2010 J jnl
A CMOS Electrochemical Impedance Spectroscopy (EIS) Biosensor Array.
IEEE Trans. Biomed. Circuits Syst.
Arun Manickam, Aaron Chevalier, Mark W. McDermott, Andrew D. Ellington, Arjang Hassibi
2010 — conf
A CMOS electrochemical impedance spectroscopy biosensor array for label-free biomolecular detection.
ISSCC
Arun Manickam, Aaron Chevalier, Mark W. McDermott, Andrew D. Ellington, Arjang Hassibi
2010 Misc conf
Emulsion Based Selection of T7 Promoters of Varying Activity.
Pacific Symposium on Biocomputing
Eric A. Davidson, Thomas Van Blarcom, Matthew Levy, Andrew D. Ellington
2009 — conf
A CMOS fluorescent-based biosensor microarray.
ISSCC
Byungchul Jang, Peiyan Cao, Aaron Chevalier, Andrew D. Ellington, Arjang Hassibi
2009 J jnl
Design Principles for Ligand-Sensing, Conformation-Switching Ribozymes.
PLoS Comput. Biol.
Xi Chen, Andrew D. Ellington
2008 — conf
Synthetic Biology Design and Analysis: A Case Study of Frequency Entrained Biological Clock.
BIBM
Peng Yu, Xi Chen, David Z. Pan, Andrew D. Ellington
2004 J jnl
AANT: the Amino Aciduchleotide Interaction Database.
Nucleic Acids Res.
Michael M. Hoffman, Maksim A. Khrapov, J. Colin Cox, Jianchao Yao, Lingnan Tong, Andrew D. Ellington
2004 J jnl
Aptamer Database.
Nucleic Acids Res.
Jennifer F. Lee, Jay R. Hesselberth, Lauren Ancel Meyers, Andrew D. Ellington
1999 — conf
Designing and selecting components for nucleic acid computers.
DNA Based Computers
Michael P. Robertson, Jay R. Hesselberth, J. Colin Cox, Andrew D. Ellington
1997 — conf
Strategies for DNA computing.
DNA Based Computers
Andrew D. Ellington, Michael P. Robertson, Ken D. James, J. Colin Cox