Andrew Carroll

12 papers Journal 11Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Accurate human genome analysis with element avidity sequencing.
BMC Bioinform.
Andrew Carroll, Alexey Kolesnikov, Daniel E. Cook, Lucas Brambrink, Kelly N. Wiseman, Sophie M. Billings, Semyon Kruglyak, Bryan R. Lajoie, Junhua Zhao, Shawn E. Levy, Cory Y. McLean, Kishwar Shafin, Maria Nattestad, Pi-Chuan Chang
2025 J jnl
Towards an AI co-scientist.
CoRR
Juraj Gottweis, Wei-Hung Weng, Alexander N. Daryin, Tao Tu, Anil Palepu, Petar Sirkovic, Artiom Myaskovsky, Felix Weissenberger, Keran Rong, Ryutaro Tanno, Khaled Saab, Dan Popovici, Jacob Blum, Fan Zhang, Katherine Chou, Avinatan Hassidim, Burak Gokturk, Amin Vahdat, Pushmeet Kohli, Yossi Matias, Andrew Carroll, Kavita Kulkarni, Nenad Tomasev, Yuan Guan, Vikram Dhillon, Eeshit Dhaval Vaishnav, Byron Lee, Tiago R. D. Costa, José R. Penadés, Gary Peltz, Yunhan Xu, Annalisa Pawlosky, Alan Karthikesalingam, Vivek Natarajan
2023 J jnl
Improving variant calling using population data and deep learning.
BMC Bioinform.
Nae-Chyun Chen, Alexey Kolesnikov, Sidharth Goel, Taedong Yun, Pi-Chuan Chang, Andrew Carroll
2023 — conf
Multimodal LLMs for Health Grounded in Individual-Specific Data.
ML4MHD
Anastasiya Belyaeva, Justin Cosentino, Farhad Hormozdiari, Krish Eswaran, Shravya Shetty, Greg Corrado, Andrew Carroll, Cory Y. McLean, Nicholas A. Furlotte
2023 J jnl
Multimodal LLMs for health grounded in individual-specific data.
CoRR
Anastasiya Belyaeva, Justin Cosentino, Farhad Hormozdiari, Krish Eswaran, Shravya Shetty, Greg Corrado, Andrew Carroll, Cory Y. McLean, Nicholas A. Furlotte
2023 J jnl
Towards Generalist Biomedical AI.
CoRR
Tao Tu, Shekoofeh Azizi, Danny Driess, Mike Schaekermann, Mohamed Amin, Pi-Chuan Chang, Andrew Carroll, Chuck Lau, Ryutaro Tanno, Ira Ktena, Basil Mustafa, Aakanksha Chowdhery, Yun Liu, Simon Kornblith, David J. Fleet, Philip Andrew Mansfield, Sushant Prakash, Renee Wong, Sunny Virmani, Christopher Semturs, S. Sara Mahdavi, Bradley Green, Ewa Dominowska, Blaise Agüera y Arcas, Joelle K. Barral, Dale R. Webster, Gregory S. Corrado, Yossi Matias, Karan Singhal, Pete Florence, Alan Karthikesalingam, Vivek Natarajan
2022 J jnl
Knowledge distillation for fast and accurate DNA sequence correction.
CoRR
Anastasiya Belyaeva, Joel Shor, Daniel E. Cook, Kishwar Shafin, Daniel Liu, Armin Töpfer, Aaron M. Wenger, William J. Rowell, Howard Yang, Alexey Kolesnikov, Cory Y. McLean, Maria Nattestad, Andrew Carroll, Pi-Chuan Chang
2021 J jnl
Accurate, scalable cohort variant calls using DeepVariant and GLnexus.
Bioinform.
Taedong Yun, Helen Li, Pi-Chuan Chang, Michael F. Lin, Andrew Carroll, Cory Y. McLean
2020 J jnl
A crowdsourced set of curated structural variants for the human genome.
PLoS Comput. Biol.
Lesley M. Chapman, Noah Spies, Patrick Pai, Chun Shen Lim, Andrew Carroll, Giuseppe Narzisi, Christopher M. Watson, Christos Proukakis, Wayne E. Clarke, Naoki Nariai, Eric T. Dawson, Garan Jones, Daniel J. Blankenberg, Christian Brueffer, Chunlin Xiao, Sree Rohit Raj Kolora, Noah Alexander, Paul Wolujewicz, Azza E. Ahmed, Graeme Smith, Saadlee Shehreen, Aaron M. Wenger, Marc Salit, Justin M. Zook
2019 J jnl
Learning from Data-Rich Problems: A Case Study on Genetic Variant Calling.
CoRR
Ren Yi, Pi-Chuan Chang, Gunjan Baid, Andrew Carroll
2016 J jnl
A hybrid computational strategy to address WGS variant analysis in >5000 samples.
BMC Bioinform.
Zhuoyi Huang, Navin Rustagi, Narayanan Veeraraghavan, Andrew Carroll, Richard A. Gibbs, Eric Boerwinkle, Manjunath Gorentla Venkata, Fuli Yu
2014 J jnl
Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline.
BMC Bioinform.
Jeffrey G. Reid, Andrew Carroll, Narayanan Veeraraghavan, Mahmoud Dahdouli, Andreas Sundquist, Adam C. English, Matthew N. Bainbridge, Simon White, William J. Salerno, Christian Buhay, Fuli Yu, Donna M. Muzny, Richard Daly, Geoff Duyk, Richard A. Gibbs, Eric Boerwinkle