Andrej Perdih

12 papers B 1Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
Water-Based Pharmacophore Modeling in Kinase Inhibitor Design: A Case Study on Fyn and Lyn Protein Kinases.
J. Chem. Inf. Model.
Martin Ljubic, Marija Sollner Dolenc, Jure Borisek, Andrej Perdih
2024 J jnl
All-Atom Simulations Reveal the Effect of Membrane Composition on the Signaling of the NKG2A/CD94/HLA-E Immune Receptor Complex.
J. Chem. Inf. Model.
Martin Ljubic, Andrej Perdih, Jure Borisek
2024 J jnl
Machine learning heralding a new development phase in molecular dynamics simulations.
Artif. Intell. Rev.
Eva Prasnikar, Martin Ljubic, Andrej Perdih, Jure Borisek
2023 J jnl
All-Atom Simulations Reveal the Intricacies of Signal Transduction upon Binding of the HLA-E Ligand to the Transmembrane Inhibitory CD94/NKG2A Receptor.
J. Chem. Inf. Model.
Martin Ljubic, Eva Prasnikar, Andrej Perdih, Jure Borisek
2022 J jnl
Catalytic Mechanism of ATP Hydrolysis in the ATPase Domain of Human DNA Topoisomerase IIα.
J. Chem. Inf. Model.
Mitja Ogrizek, Matej Janezic, Katja Valjavec, Andrej Perdih
2021 J jnl
All-Atom Simulations Reveal a Key Interaction Network in the HLA-E/NKG2A/CD94 Immune Complex Fine-Tuned by the Nonameric Peptide.
J. Chem. Inf. Model.
Eva Prasnikar, Andrej Perdih, Jure Borisek
2020 B conf
A Multilingual Evaluation Dataset for Monolingual Word Sense Alignment.
LREC
Sina Ahmadi, John Philip McCrae, Sanni Nimb, Anas Fahad Khan, Monica Monachini, Bolette S. Pedersen, Thierry Declerck, Tanja Wissik, Andrea Bellandi, Irene Pisani, Thomas Troelsgård, Sussi Olsen, Simon Krek, Veronika Lipp, Tamás Váradi, László Simon, András Gyorffy, Carole Tiberius, Tanneke Schoonheim, Yifat Ben Moshe, Maya Rudich, Raya Abu Ahmad, Dorielle Lonke, Kira Kovalenko, Margit Langemets, Jelena Kallas, Oksana Dereza, Theodorus Fransen, David Cillessen, David Lindemann, Mikel Alonso, Ana Salgado, José-Luis Sancho, Rafael-J. Ureña-Ruiz, Jordi Porta-Zamorano, Kiril Simov, Petya Osenova, Zara Kancheva, Ivaylo Radev, Ranka Stankovic, Andrej Perdih, Dejan Gabrovsek
2020 J jnl
Substituted 4, 5′-Bithiazoles as Catalytic Inhibitors of Human DNA Topoisomerase IIα.
J. Chem. Inf. Model.
Kaja Bergant Loboda, Matej Janezic, Martina Stampar, Bojana Zegura, Metka Filipic, Andrej Perdih
2015 J jnl
Furan-based benzene mono- and dicarboxylic acid derivatives as multiple inhibitors of the bacterial Mur ligases (MurC-MurF): experimental and computational characterization.
J. Comput. Aided Mol. Des.
Andrej Perdih, Martina Hrast, Kaja Pureber, Hélène Barreteau, Simona Golic Grdadolnik, Darko Kocjan, Stanislav Gobec, Tomaz Solmajer, Gerhard Wolber
2014 J jnl
Inhibitor Design Strategy Based on an Enzyme Structural Flexibility: A Case of Bacterial MurD Ligase.
J. Chem. Inf. Model.
Andrej Perdih, Martina Hrast, Hélène Barreteau, Stanislav Gobec, Gerhard Wolber, Tomaz Solmajer
2013 J jnl
Cluster-based molecular docking study for
J. Comput. Chem.
Nikola Minovski, Andrej Perdih, Marjana Novic, Tomaz Solmajer
2013 J jnl
Molecular dynamics simulation and linear interaction energy study of d-Glu-based inhibitors of the MurD ligase.
J. Comput. Aided Mol. Des.
Andrej Perdih, Gerhard Wolber, Tomaz Solmajer