Anastasios Nentidis

55 papers A 1B 4Journal 21Unranked 29
YearRankTypeTitle / Venue / Authors
2026 — conf
BioASQ at CLEF2026: The Fourteenth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge.
ECIR (4)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Martin Krallinger, Miguel Rodríguez-Ortega, Eduard Rodriguez-López, Natalia V. Loukachevitch, Igor Rozhkov, Elena Tutubalina, Grigorios Tsoumakas, George Giannakoulas, Dimitris Dimitriadis, Alexandra Bekiaridou, Athanasios Samaras, Vasiliki Patsiou, Giorgio Maria Di Nunzio, Nicola Ferro, Stefano Marchesin, Marco Martinelli, Gianmaria Silvello, Georgios Paliouras
2025 — conf
A framework for disease-specific information extraction from biomedical literature and open databases, aiming at drug re-purposing.
SCOLIA
Stavroula Svolou, Fotis Aisopos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
2025 — conf
BioASQ at CLEF2025: The Thirteenth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge.
ECIR (5)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Martin Krallinger, Miguel Rodríguez-Ortega, Natalia V. Loukachevitch, Andrey Sakhovskiy, Elena Tutubalina, Grigorios Tsoumakas, George Giannakoulas, Alexandra Bekiaridou, Athanasios Samaras, Giorgio Maria Di Nunzio, Nicola Ferro, Stefano Marchesin, Laura Menotti, Gianmaria Silvello, Georgios Paliouras
2025 J jnl
Dealing with Inconsistency for Reasoning over Knowledge Graphs: A Survey.
CoRR
Anastasios Nentidis, Charilaos Akasiadis, Angelos Charalambidis, Alexander Artikis
2025 J jnl
Overview of BioASQ 2024: The twelfth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CoRR
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Martin Krallinger, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina, Georgios Paliouras
2025 — conf
Overview of BioASQ 2025: The Thirteenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CLEF
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Martin Krallinger, Miguel Rodríguez-Ortega, Eduard Rodriguez-López, Natalia V. Loukachevitch, Andrey Sakhovskiy, Elena Tutubalina, Dimitris Dimitriadis, Grigorios Tsoumakas, George Giannakoulas, Alexandra Bekiaridou, Athanasios Samaras, Giorgio Maria Di Nunzio, Nicola Ferro, Stefano Marchesin, Marco Martinelli, Gianmaria Silvello, Georgios Paliouras
2025 J jnl
Overview of BioASQ 2025: The Thirteenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CoRR
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Martin Krallinger, Miguel Rodríguez-Ortega, Eduard Rodriguez-López, Natalia V. Loukachevitch, Andrey Sakhovskiy, Elena Tutubalina, Dimitris Dimitriadis, Grigorios Tsoumakas, George Giannakoulas, Alexandra Bekiaridou, Athanasios Samaras, Giorgio Maria Di Nunzio, Nicola Ferro, Stefano Marchesin, Marco Martinelli, Gianmaria Silvello, Georgios Paliouras
2025 — conf
Overview of BioASQ Tasks 13b and Synergy13 in CLEF2025.
CLEF (Working Notes)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras
2024 J jnl
BioASQ Synergy: a dialogue between question-answering systems and biomedical experts for promoting COVID-19 research.
J. Am. Medical Informatics Assoc.
Anastasia Krithara, Anastasios Nentidis, Eirini Vandorou, Georgios Katsimpras, Yannis Almirantis, Magda Arnal, Adomas Bunevicius, Eulàlia Farré-Maduell, Maya Kassiss, Vasileios Konstantakos, Sherri Matis-Mitchell, Dimitris Polychronopoulos, Jesus Rodriguez-Pascual, Eleftherios Samaras, Martina Samiotaki, Despina Sanoudou, Aspasia Vozi, Georgios Paliouras
2024 — conf
BioASQ at CLEF2024: The Twelfth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge.
ECIR (5)
Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Martin Krallinger, Luis Gascó Sánchez, Salvador Lima-López, Eulàlia Farré, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina
2024 — conf
Detecting and Fixing Inconsistency of Large Knowledge Graphs.
SETN
Charilaos Akasiadis, Anastasios Nentidis, Angelos Charalambidis, Alexander Artikis
2024 — conf
Overview of BioASQ 2024: The Twelfth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CLEF (2)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Martin Krallinger, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina, Georgios Paliouras
2024 — conf
Overview of BioASQ Tasks 12b and Synergy12 in CLEF2024.
CLEF (Working Notes)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras
2024 — conf
Overview of MultiCardioNER task at BioASQ 2024 on Medical Specialty and Language Adaptation of Clinical NER Systems for Spanish, English and Italian.
CLEF (Working Notes)
Salvador Lima-López, Eulàlia Farré-Maduell, Jan Rodríguez-Miret, Miguel Rodríguez-Ortega, Livia Lilli, Jacopo Lenkowicz, Giovanna Ceroni, Jonathan Kossof, Anoop Shah, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger
2024 A conf
Zero-Shot Relabeling of Weak Labels for Fine-Grained Semantic Indexing of Biomedical Literature.
ECAI
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2024 J jnl
iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine.
CoRR
Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras
2023 — conf
BioASQ at CLEF2023: The Eleventh Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge.
ECIR (3)
Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Eulàlia Farré-Maduell, Salvador Lima-López, Martin Krallinger
2023 J jnl
Large-scale fine-grained semantic indexing of biomedical literature based on weakly-supervised deep learning.
CoRR
Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2023 J jnl
Large-scale investigation of weakly-supervised deep learning for the fine-grained semantic indexing of biomedical literature.
J. Biomed. Informatics
Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2023 — conf
Overview of BioASQ 2023: The Eleventh BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CLEF
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras
2023 J jnl
Overview of BioASQ 2023: The eleventh BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CoRR
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras
2023 — conf
Overview of BioASQ Tasks 11b and Synergy11 in CLEF2023.
CLEF (Working Notes)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras
2023 — conf
Overview of MedProcNER Task on Medical Procedure Detection and Entity Linking at BioASQ 2023.
CLEF (Working Notes)
Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger
2023 J jnl
The road from manual to automatic semantic indexing of biomedical literature: a 10 years journey.
Frontiers Res. Metrics Anal.
Anastasia Krithara, James G. Mork, Anastasios Nentidis, Georgios Paliouras
2022 — conf
BioASQ at CLEF2022: The Tenth Edition of the Large-scale Biomedical Semantic Indexing and Question Answering Challenge.
ECIR (2)
Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Luis Gascó, Martin Krallinger
2022 J jnl
CRISPRedict: a CRISPR-Cas9 web tool for interpretable efficiency predictions.
Nucleic Acids Res.
Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
2022 — conf
Modeling the off-target effects of CRISPR-Cas9 experiments for the treatment of Duchenne Muscular Dystrophy.
SETN
Eleni Koutsoni, Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
2022 — conf
Overview of BioASQ 2022: The Tenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CLEF
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras
2022 J jnl
Overview of BioASQ 2022: The tenth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CoRR
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras
2022 — conf
Overview of BioASQ Tasks 10a, 10b and Synergy10 in CLEF2022.
CLEF (Working Notes)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras
2022 — conf
Overview of DisTEMIST at BioASQ: Automatic detection and normalization of diseases from clinical texts: results, methods, evaluation and multilingual resources.
CLEF (Working Notes)
Antonio Miranda-Escalada, Luis Gascó, Salvador Lima-López, Eulàlia Farré-Maduell, Darryl Estrada, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger
2021 — conf
BioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering.
ECIR (2)
Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Martin Krallinger, Antonio Miranda
2021 J jnl
Harvesting the Public MeSH Note field.
CoRR
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2021 J jnl
Overview of BioASQ 2020: The eighth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CoRR
Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras
2021 — conf
Overview of BioASQ 2021-MESINESP track. Evaluation of advance hierarchical classification techniques for scientific literature, patents and clinical trials.
CLEF (Working Notes)
Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Darryl Estrada-Zavala, Renato Toshiyuki Murasaki, Elena Primo-Peña, Cristina Bojo-Canales, Georgios Paliouras, Martin Krallinger
2021 — conf
Overview of BioASQ 2021: The Ninth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CLEF
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras
2021 J jnl
Overview of BioASQ 2021: The ninth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CoRR
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras
2021 — conf
Overview of BioASQ Tasks 9a, 9b and Synergy in CLEF2021.
CLEF (Working Notes)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras
2021 J jnl
What is all this new MeSH about?
Int. J. Digit. Libr.
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2021 J jnl
What is all this new MeSH about? Exploring the semantic provenance of new descriptors in the MeSH thesaurus.
CoRR
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2020 J jnl
Beyond MeSH: Fine-Grained Semantic Indexing of Biomedical Literature based on Weak Supervision.
CoRR
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2020 J jnl
Beyond MeSH: Fine-grained semantic indexing of biomedical literature based on weak supervision.
Inf. Process. Manag.
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2020 — conf
BioASQ at CLEF2020: Large-Scale Biomedical Semantic Indexing and Question Answering.
ECIR (2)
Martin Krallinger, Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Marta Villegas
2020 B conf
Drug-Drug Interaction Prediction on a Biomedical Literature Knowledge Graph.
AIME
Konstantinos Bougiatiotis, Fotis Aisopos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
2020 J jnl
Error detection in Knowledge Graphs: Path Ranking, Embeddings or both?
CoRR
Romanos Fasoulis, Konstantinos Bougiatiotis, Fotis Aisopos, Anastasios Nentidis, Georgios Paliouras
2020 — conf
Overview of BioASQ 2020: The Eighth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.
CLEF
Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras
2020 — conf
Overview of BioASQ 8a and 8b: Results of the Eighth Edition of the BioASQ Tasks a and b.
CLEF (Working Notes)
Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Georgios Paliouras
2020 — conf
Overview of MESINESP, a Spanish Medical Semantic Indexing Task within BioASQ 2020.
CLEF (Working Notes)
Carlos Rodríguez Penagos, Anastasios Nentidis, Aitor Gonzalez-Agirre, Alejandro Asensio, Jordi Armengol-Estapé, Anastasia Krithara, Marta Villegas, Georgios Paliouras, Martin Krallinger
2020 J jnl
Results of the seventh edition of the BioASQ Challenge.
CoRR
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
2020 B conf
iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge.
CBMS
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
2019 B conf
Beyond MeSH: Fine-Grained Semantic Indexing of Biomedical Literature Based on Weak Supervision.
CBMS
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
2019 — conf
Results of the Seventh Edition of the BioASQ Challenge.
PKDD/ECML Workshops (2)
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
2019 J jnl
Semantic integration of disease-specific knowledge.
CoRR
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
2019 B conf
iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine.
CBMS
Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras
2017 — conf
Results of the fifth edition of the BioASQ Challenge.
BioNLP
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras, Ioannis A. Kakadiaris