Ananth Grama - RankMe

220 papers A* 17A 15B 21C 4Misc 14Journal 111Unranked 31

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	An agent-based model of citation behavior. Appl. Netw. Sci. George Chacko, Minhyuk Park, Vikram Ramavarapu, Ananth Grama, Pablo Robles-Granda, Tandy J. Warnow
2026	J	`jnl`	SARL: Label-Free Reinforcement Learning by Rewarding Reasoning Topology. CoRR Yifan Wang, Bolian Li, David Cho, Ruqi Zhang, Fanping Sui, Ananth Grama
2025	J	`jnl`	An Agent-based Model of Citation Behavior. CoRR George Chacko, Minhyuk Park, Vikram Ramavarapu, Ananth Grama, Pablo Robles-Granda, Tandy J. Warnow
2025	B	`conf`	CKH: Causal Knowledge Hierarchy for Estimating Structural Causal Models from Data and Priors. COMPSAC Riddhiman Adib, Md Mobasshir Arshed Naved, Chih-Hao Fang, Md. Osman Gani, Ananth Grama, Paul M. Griffin, Uzma Hasan, Sheikh Iqbal Ahamed, Mohammad Adibuzzaman
2025	J	`jnl`	DRIFT: Learning from Abundant User Dissatisfaction in Real-World Preference Learning. CoRR Yifan Wang, Bolian Li, Junlin Wu, Zhaoxuan Tan, Zheli Liu, Ruqi Zhang, Ananth Grama, Qingkai Zeng
2025	—	`conf`	Deconvolving Complex Neuronal Networks into Interpretable Task-Specific Connectomes. BCB Yifan Wang, Ananth Grama, Vikram Ravindra
2025	J	`jnl`	Fault Oblivious Eigenvalue Solver. CoRR Jayanta Mukherjee, Xuejiao Kang, David F. Gleich, Ahmed Sameh, Ananth Grama
2025	A*	`conf`	From Low Rank Gradient Subspace Stabilization to Low-Rank Weights: Observations, Theories, and Applications. ICML Ajay Kumar Jaiswal, Yifan Wang, Lu Yin, Shiwei Liu, Runjin Chen, Jiawei Zhao, Ananth Grama, Yuandong Tian, Zhangyang Wang
2025	J	`jnl`	GeneFlow: Translation of Single-cell Gene Expression to Histopathological Images via Rectified Flow. CoRR Mengbo Wang, Shourya Verma, Aditya Malusare, Luopin Wang, Yiyang Lu, Vaneet Aggarwal, Mario Sola, Ananth Grama, Nadia Atallah Lanman
2025	J	`jnl`	LLMs Can Get "Brain Rot"! CoRR Shuo Xing, Junyuan Hong, Yifan Wang, Runjin Chen, Zhenyu Zhang, Ananth Grama, Zhengzhong Tu, Zhangyang Wang
2025	J	`jnl`	More is Less: The Pitfalls of Multi-Model Synthetic Preference Data in DPO Safety Alignment. CoRR Yifan Wang, Runjin Chen, Bolian Li, David Cho, Yihe Deng, Ruqi Zhang, Tianlong Chen, Zhangyang Wang, Ananth Grama, Junyuan Hong
2025	A*	`conf`	No Free Lunch: Fundamental Limits of Learning Non-Hallucinating Generative Models. ICLR Changlong Wu, Ananth Grama, Wojciech Szpankowski
2025	J	`jnl`	RestoRect: Degraded Image Restoration via Latent Rectified Flow & Feature Distillation. CoRR Shourya Verma, Mengbo Wang, Nadia Atallah Lanman, Ananth Grama
2025	J	`jnl`	Unified Multi-Modal Interactive & Reactive 3D Motion Generation via Rectified Flow. CoRR Prerit Gupta, Shourya Verma, Ananth Grama, Aniket Bera
2024	A*	`conf`	A Theory of Fault-Tolerant Learning. ICML Changlong Wu, Yifan Wang, Ananth Grama
2024	J	`jnl`	Cascade Reward Sampling for Efficient Decoding-Time Alignment. CoRR Bolian Li, Yifan Wang, Ananth Grama, Ruqi Zhang
2024	J	`jnl`	Deconvolving Complex Neuronal Networks into Interpretable Task-Specific Connectomes. CoRR Yifan Wang, Vikram Ravindra, Ananth Grama
2024	—	`conf`	Generalized Learning of Coefficients in Spectral Graph Convolutional Networks. ICKG Mustafa Coskun, Ananth Grama, Mehmet Koyutürk
2024	J	`jnl`	Generalized Learning of Coefficients in Spectral Graph Convolutional Networks. CoRR Mustafa Coskun, Ananth Grama, Mehmet Koyutürk
2024	A*	`conf`	Information-theoretic Limits of Online Classification with Noisy Labels. NeurIPS Changlong Wu, Ananth Grama, Wojciech Szpankowski
2024	—	`conf`	Integrating ML/AI workflows in a Streaming Data Management and Processing Platform for Building Energy Research. PEARC Jaewoo Shin, Lan Zhao, Carol X. Song, Dikai Xu, Ming Qu, Ananth Grama, Dongyan Xu
2024	J	`jnl`	No Free Lunch: Fundamental Limits of Learning Non-Hallucinating Generative Models. CoRR Changlong Wu, Ananth Grama, Wojciech Szpankowski
2023	J	`jnl`	Aligning Spatially Constrained Graphs. IEEE Trans. Knowl. Data Eng. Vikram Ravindra, Huda Nassar, David F. Gleich, Ananth Grama
2023	J	`jnl`	Expected Worst Case Regret via Stochastic Sequential Covering. Trans. Mach. Learn. Res. Changlong Wu, Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2023	A*	`conf`	Learning Functional Distributions with Private Labels. ICML Changlong Wu, Yifan Wang, Ananth Grama, Wojciech Szpankowski
2023	A*	`conf`	Online Learning in Dynamically Changing Environments. COLT Changlong Wu, Ananth Grama, Wojciech Szpankowski
2023	J	`jnl`	Online Learning in Dynamically Changing Environments. CoRR Changlong Wu, Ananth Grama, Wojciech Szpankowski
2023	J	`jnl`	Regret Bounds for Log-Loss via Bayesian Algorithms. IEEE Trans. Inf. Theory Changlong Wu, Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2023	J	`jnl`	Robust Online Classification: From Estimation to Denoising. CoRR Changlong Wu, Ananth Grama, Wojciech Szpankowski
2022	J	`jnl`	CKH: Causal Knowledge Hierarchy for Estimating Structural Causal Models from Data and Priors. CoRR Riddhiman Adib, Md Mobasshir Arshed Naved, Chih-Hao Fang, Md. Osman Gani, Ananth Grama, Paul M. Griffin, Sheikh Iqbal Ahamed, Mohammad Adibuzzaman
2022	J	`jnl`	Expected Worst Case Regret via Stochastic Sequential Covering. CoRR Changlong Wu, Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2022	A*	`conf`	Precise Regret Bounds for Log-loss via a Truncated Bayesian Algorithm. NeurIPS Changlong Wu, Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2022	J	`jnl`	Precise Regret Bounds for Log-loss via a Truncated Bayesian Algorithm. CoRR Changlong Wu, Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2022	B	`conf`	Sequential vs. Fixed Design Regrets in Online Learning. ISIT Changlong Wu, Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2022	A*	`conf`	Toward Physically Realizable Quantum Neural Networks. AAAI Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2022	J	`jnl`	Toward Physically Realizable Quantum Neural Networks. CoRR Mohsen Heidari, Ananth Grama, Wojciech Szpankowski
2021	J	`jnl`	Adaptive Erasure Coded Fault Tolerant Linear System Solver. ACM Trans. Parallel Comput. Xuejiao Kang, David F. Gleich, Ahmed H. Sameh, Ananth Grama
2021	—	`conf`	De-anonymization Attacks on Neuroimaging Datasets. SIGMOD Conference Vikram Ravindra, Ananth Grama
2021	B	`conf`	Identifying Coherent Subgraphs In Dynamic Brain Networks. ICIP Vikram Ravindra, Geoffrey Sanders, Ananth Grama
2021	J	`jnl`	Scalable Algorithms for Multiple Network Alignment. SIAM J. Sci. Comput. Huda Nassar, Georgios Kollias, Ananth Grama, David F. Gleich
2020	—	`conf`	A Unified Cloud-Native Architecture For Heterogeneous Data Aggregation And Computation. BCB Fatemeh Rouzbeh, Ananth Grama, Paul M. Griffin, Mohammad Adibuzzaman
2020	A*	`conf`	Characterizing Similarity of Visual Stimulus from Associated Neuronal Response. IJCAI Vikram Ravindra, Ananth Grama
2020	—	`conf`	Collaborative Cloud Computing Framework for Health Data with Open Source Technologies. BCB Fatemeh Rouzbeh, Ananth Grama, Paul M. Griffin, Mohammad Adibuzzaman
2020	J	`jnl`	Collaborative Cloud Computing Framework for Health Data with Open Source Technologies. CoRR Fatemeh Rouzbeh, Ananth Grama, Paul M. Griffin, Mohammad Adibuzzaman
2020	J	`jnl`	Integrated querying and version control of context-specific biological networks. Database J. Biol. Databases Curation Tyler Cowman, Mustafa Coskun, Ananth Grama, Mehmet Koyutürk
2020	A	`conf`	Newton-ADMM: a distributed GPU-accelerated optimizer for multiclass classification problems. SC Chih-Hao Fang, Sudhir B. Kylasa, Fred Roosta, Michael W. Mahoney, Ananth Grama
2020	J	`jnl`	Optimistic scheduling with service guarantees. J. Parallel Distributed Comput. Karthik Kambatla, Vamsee Yarlagadda, Iñigo Goiri, Ananth Grama
2020	J	`jnl`	Randomized Linear Algebra Approaches to Estimate the von Neumann Entropy of Density Matrices. IEEE Trans. Inf. Theory Eugenia-Maria Kontopoulou, Gregory-Paul Dexter, Wojciech Szpankowski, Ananth Grama, Petros Drineas
2019	J	`jnl`	AIKYATAN: mapping distal regulatory elements using convolutional learning on GPU. BMC Bioinform. Chih-Hao Fang, Nawanol Theera-Ampornpunt, Michael A. Roth, Ananth Grama, Somali Chaterji
2019	J	`jnl`	De-anonymization Attacks on Neuroimaging Datasets. CoRR Vikram Ravindra, Ananth Grama
2019	J	`jnl`	Federation in genomics pipelines: techniques and challenges. Briefings Bioinform. Somali Chaterji, Jinkyu Koo, Ninghui Li, Folker Meyer, Ananth Grama, Saurabh Bagchi
2019	A	`conf`	GPU Accelerated Sub-Sampled Newton's Method for Convex Classification Problems. SDM Sudhir B. Kylasa, Fred (Farbod) Roosta, Michael W. Mahoney, Ananth Grama
2019	J	`jnl`	MG-RAST version 4 - lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis. Briefings Bioinform. Folker Meyer, Saurabh Bagchi, Somali Chaterji, Wolfgang Gerlach, Ananth Grama, Travis Harrison, Tobias Paczian, William L. Trimble, Andreas Wilke
2019	—	`conf`	Rigid Graph Alignment. COMPLEX NETWORKS (1) Vikram Ravindra, Huda Nassar, David F. Gleich, Ananth Grama
2019	J	`jnl`	Rigid Graph Alignment. CoRR Vikram Ravindra, Huda Nassar, David F. Gleich, Ananth Grama
2018	J	`jnl`	Constructing Compact Brain Connectomes for Individual Fingerprinting. CoRR Vikram Ravindra, Petros Drineas, Ananth Grama
2018	J	`jnl`	Distributed Second-order Convex Optimization. CoRR Chih-Hao Fang, Sudhir B. Kylasa, Farbod Roosta-Khorasani, Michael W. Mahoney, Ananth Grama
2018	J	`jnl`	Frontiers of Science of Information: Shannon Meets Turing. Computer Wojciech Szpankowski, Ananth Grama
2018	J	`jnl`	GPU Accelerated Sub-Sampled Newton\textsf{'}s Method. CoRR Sudhir B. Kylasa, Farbod Roosta-Khorasani, Michael W. Mahoney, Ananth Grama
2018	J	`jnl`	Indexed Fast Network Proximity Querying. Proc. VLDB Endow. Mustafa Coskun, Ananth Grama, Mehmet Koyutürk
2018	A*	`conf`	Low Rank Spectral Network Alignment. WWW Huda Nassar, Nate Veldt, Shahin Mohammadi, Ananth Grama, David F. Gleich
2018	J	`jnl`	Low rank methods for multiple network alignment. CoRR Huda Nassar, Georgios Kollias, Ananth Grama, David F. Gleich
2018	—	`conf`	MODE: automated neural network model debugging via state differential analysis and input selection. ESEC/SIGSOFT FSE Shiqing Ma, Yingqi Liu, Wen-Chuan Lee, Xiangyu Zhang, Ananth Grama
2018	B	`conf`	Randomized Linear Algebra Approaches to Estimate the Von Neumann Entropy of Density Matrices. ISIT Eugenia-Maria Kontopoulou, Ananth Grama, Wojciech Szpankowski, Petros Drineas
2018	J	`jnl`	Randomized Linear Algebra Approaches to Estimate the Von Neumann Entropy of Density Matrices. CoRR Eugenia-Maria Kontopoulou, Ananth Grama, Wojciech Szpankowski, Petros Drineas
2018	A	`conf`	UBIS: Utilization-Aware Cluster Scheduling. IPDPS Karthik Kambatla, Vamsee Yarlagadda, Iñigo Goiri, Ananth Grama
2018	J	`jnl`	VAYU: Accelerating stream processing applications through dynamic network-aware topology re-optimization. J. Parallel Distributed Comput. Naresh Rapolu, Srimat Chakradhar, Ananth Grama
2017	J	`jnl`	A Critical Survey of Deconvolution Methods for Separating Cell Types in Complex Tissues. Proc. IEEE Shahin Mohammadi, Neta S. Zuckerman, Andrea Goldsmith, Ananth Grama
2017	A	`conf`	Distributed Fault Tolerant Linear System Solvers Based on Erasure Coding. ICDCS Xuejiao Kang, David F. Gleich, Ahmed H. Sameh, Ananth Grama
2017	J	`jnl`	Erasure Coding for Fault-Oblivious Linear System Solvers. SIAM J. Sci. Comput. Yao Zhu, David F. Gleich, Ananth Grama
2017	—	`conf`	Introduction to HiCOMB Workshop. IPDPS Workshops Alex Pothen, Ananth Grama
2017	J	`jnl`	Pluribus - Exploring the Limits of Error Correction Using a Suffix Tree. IEEE ACM Trans. Comput. Biol. Bioinform. Daniel M. Savel, Thomas LaFramboise, Ananth Grama, Mehmet Koyutürk
2017	J	`jnl`	Principles and Applications of Science of Information. Proc. IEEE Thomas A. Courtade, Ananth Grama, Michael W. Mahoney, Tsachy Weissman
2017	A	`conf`	Rafiki: a middleware for parameter tuning of NoSQL datastores for dynamic metagenomics workloads. Middleware Ashraf Mahgoub, Paul Wood, Sachandhan Ganesh, Subrata Mitra, Wolfgang Gerlach, Travis Harrison, Folker Meyer, Ananth Grama, Saurabh Bagchi, Somali Chaterji
2017	B	`conf`	Recovery of vertex orderings in dynamic graphs. ISIT Abram Magner, Ananth Grama, Jithin K. Sreedharan, Wojciech Szpankowski
2017	Misc	`conf`	Suitability of NoSQL systems - Cassandra and ScyllaDB - For IoT workloads. COMSNETS Ashraf Mahgoub, Sachandhan Ganesh, Folker Meyer, Ananth Grama, Somali Chaterji
2017	J	`jnl`	Triangular Alignment (TAME): A Tensor-Based Approach for Higher-Order Network Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. Shahin Mohammadi, David F. Gleich, Tamara G. Kolda, Ananth Grama
2016	J	`jnl`	A convex optimization approach for identification of human tissue-specific interactomes. Bioinform. Shahin Mohammadi, Ananth Grama
2016	—	`conf`	Closing the Data Loop: An Integrated Open Access Analysis Platform for the MIMIC Database. CinC Mohammad Adibuzzaman, Ken Musselman, Alistair E. W. Johnson, Paul Brown, Zachary Pitluk Pitluk, Ananth Grama
2016	J	`jnl`	Combining Density and Overlap (CoDO): A New Method for Assessing the Significance of Overlap Among Subgraphs. CoRR Abram Magner, Shahin Mohammadi, Ananth Grama
2016	—	`conf`	Context-Specific Recommendation System for Predicting Similar PubMed Articles. ICDM Workshops Shahin Mohammadi, Sudhir B. Kylasa, Giorgios Kollias, Ananth Grama
2016	—	`conf`	De novo identification of cell type hierarchy with application to compound marker detection. BCB Shahin Mohammadi, Ananth Grama
2016	A*	`conf`	Efficient Processing of Network Proximity Queries via Chebyshev Acceleration. KDD Mustafa Coskun, Ananth Grama, Mehmet Koyutürk
2016	Misc	`conf`	Fast training on large genomics data using distributed Support Vector Machines. COMSNETS Nawanol Theera-Ampornpunt, Seong Gon Kim, Asish Ghoshal, Saurabh Bagchi, Ananth Grama, Somali Chaterji
2016	J	`jnl`	Fundamental Bounds and Approaches to Sequence Reconstruction from Nanopore Sequencers. CoRR Jarek Duda, Wojciech Szpankowski, Ananth Grama
2016	J	`jnl`	Fundamental Bounds for Sequence Reconstruction From Nanopore Sequencers. IEEE Trans. Mol. Biol. Multi Scale Commun. Abram Magner, Jaroslaw Duda, Wojciech Szpankowski, Ananth Grama
2016	J	`jnl`	Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions. BMC Syst. Biol. Seong Gon Kim, Nawanol Theera-Ampornpunt, Chih-Hao Fang, Mrudul Harwani, Ananth Grama, Somali Chaterji
2016	J	`jnl`	Social ties and checkin sites: connections and latent structures in location-based social networks. Soc. Netw. Anal. Min. Sudhir B. Kylasa, Giorgios Kollias, Ananth Grama
2016	J	`jnl`	The MG-RAST metagenomics database and portal in 2015. Nucleic Acids Res. Andreas Wilke, Jared Bischof, Wolfgang Gerlach, Elizabeth M. Glass, Travis Harrison, Kevin P. Keegan, Tobias Paczian, William L. Trimble, Saurabh Bagchi, Ananth Grama, Somali Chaterji, Folker Meyer
2015	J	`jnl`	A Critical Survey of Deconvolution Methods for Separating cell-types in Complex Tissues. CoRR Shahin Mohammadi, Neta S. Zuckerman, Andrea J. Goldsmith, Ananth Grama
2015	—	`conf`	An ensemble SVM model for the accurate prediction of non-canonical MicroRNA targets. BCB Asish Ghoshal, Ananth Grama, Saurabh Bagchi, Somali Chaterji
2015	—	`conf`	Interpretable deep neural networks for enhancer prediction. BIBM Seong Gon Kim, Nawanol Theera-Ampornpunt, Ananth Grama, Somali Chaterji
2015	J	`jnl`	Scope and limitations of yeast as a model organism for studying human tissue-specific pathways. BMC Syst. Biol. Shahin Mohammadi, Baharak Saberidokht, Shankar Subramaniam, Ananth Grama
2015	B	`conf`	Social ties and checkin sites: Connections and latent structures in Location Based Social Networks. ASONAM Sudhir B. Kylasa, Giorgios Kollias, Ananth Grama
2015	J	`jnl`	Triangular Alignment (TAME): A Tensor-based Approach for Higher-order Network Alignment. CoRR Shahin Mohammadi, David F. Gleich, Tamara G. Kolda, Ananth Grama
2014	J	`jnl`	A universal quantum circuit scheme for finding complex eigenvalues. Quantum Inf. Process. Anmer Daskin, Ananth Grama, Sabre Kais
2014	J	`jnl`	Erasure coding for fault oblivious linear system solvers. CoRR David F. Gleich, Ananth Grama, Yao Zhu
2014	J	`jnl`	Fast parallel algorithms for graph similarity and matching. J. Parallel Distributed Comput. Giorgios Kollias, Madan Sathe, Olaf Schenk, Ananth Grama
2014	J	`jnl`	Multiple network alignment on quantum computers. Quantum Inf. Process. Anmer Daskin, Ananth Grama, Sabre Kais
2014	J	`jnl`	Parallel matrix algorithms. Parallel Comput. Costas Bekas, Ananth Grama, Yousef Saad, Olaf Schenk
2014	J	`jnl`	PuReMD-GPU: A reactive molecular dynamics simulation package for GPUs. J. Comput. Phys. Sudhir B. Kylasa, Hasan Metin Aktulga, Ananth Grama
2014	J	`jnl`	Quantum Random State Generation with Predefined Entanglement Constraint. CoRR Anmer Daskin, Ananth Grama, Sabre Kais
2014	J	`jnl`	Surfing the Network for Ranking by Multidamping. IEEE Trans. Knowl. Data Eng. Giorgios Kollias, Efstratios Gallopoulos, Ananth Grama
2014	J	`jnl`	Trends in big data analytics. J. Parallel Distributed Comput. Karthik Kambatla, Giorgios Kollias, Vipin Kumar, Ananth Grama
2013	J	`jnl`	A Universal Quantum Circuit Scheme For Finding Complex Eigenvalues of Non-unitary Matrices CoRR Anmer Daskin, Ananth Grama, Sabre Kais
2013	J	`jnl`	Concurrent programming constructs for parallel MPI applications - The MPI threads library. J. Supercomput. Tobias Berka, Giorgios Kollias, Helge Hagenauer, Marián Vajtersic, Ananth Grama
2013	J	`jnl`	Inferring the effective TOR-dependent network: a computational study in yeast. BMC Syst. Biol. Shahin Mohammadi, Shankar Subramaniam, Ananth Grama
2013	—	`conf`	M-Lock: Accelerating Distributed Transactions on Key-Value Stores through Dynamic Lock Localization. IEEE CLOUD Naresh Rapolu, Srimat Chakradhar, Adnan Hassan, Ananth Grama
2013	J	`jnl`	Multiple Network Alignment on Quantum Computers. CoRR Anmer Daskin, Ananth Grama, Sabre Kais
2013	—	`conf`	Suffix-Tree Based Error Correction of NGS Reads Using Multiple Manifestations of an Error. BCB Daniel M. Savel, Thomas LaFramboise, Ananth Grama, Mehmet Koyutürk
2013	J	`jnl`	Using hierarchical data mining to characterize performance of wireless system configurations. Adv. Eng. Softw. Alex Verstak, Naren Ramakrishnan, Layne T. Watson, Jian He, Clifford A. Shaffer, Ananth Grama
2012	—	`book`	High-Performance Scientific Computing - Algorithms and Applications. Michael W. Berry, Kyle A. Gallivan, Efstratios Gallopoulos, Ananth Grama, Bernard Philippe
2012	J	`jnl`	Network Similarity Decomposition (NSD): A Fast and Scalable Approach to Network Alignment. IEEE Trans. Knowl. Data Eng. Giorgios Kollias, Shahin Mohammadi, Ananth Grama
2012	—	`ch.`	Parallel Numerical Computing from Illiac IV to Exascale - The Contributions of Ahmed H. Sameh. High-Performance Scientific Computing Kyle A. Gallivan, Efstratios Gallopoulos, Ananth Grama, Bernard Philippe, Eric Polizzi, Yousef Saad, Faisal Saied, Danny C. Sorensen
2012	J	`jnl`	Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques. Parallel Comput. Hasan Metin Aktulga, Joseph C. Fogarty, Sagar A. Pandit, Ananth Grama
2012	J	`jnl`	Reactive Molecular Dynamics: Numerical Methods and Algorithmic Techniques. SIAM J. Sci. Comput. Hasan Metin Aktulga, Sagar Pandit, Adri C. T. van Duin, Ananth Grama
2012	Misc	`conf`	Role of Synthetic Genetic Interactions in Understanding Functional Interactions Among Pathways. Pacific Symposium on Biocomputing Shahin Mohammadi, Giorgios Kollias, Ananth Grama
2012	J	`jnl`	Universal Programmable Quantum Circuit Schemes to Emulate an Operator CoRR Anmer Daskin, Ananth Grama, Giorgios Kollias, Sabre Kais
2011	—	`ch.`	Asynchronous Iterative Algorithms. Encyclopedia of Parallel Computing Giorgios Kollias, Ananth Grama, Zhiyuan Li
2011	J	`jnl`	Performance models for the Spike banded linear system solver. Sci. Program. Murat Manguoglu, Faisal Saied, Ahmed H. Sameh, Ananth Grama
2011	—	`conf`	TransMR: Data-Centric Programming Beyond Data Parallelism. HotCloud Naresh Rapolu, Karthik Kambatla, Suresh Jagannathan, Ananth Grama
2010	C	`conf`	Asynchronous Algorithms in MapReduce. CLUSTER Karthik Kambatla, Naresh Rapolu, Suresh Jagannathan, Ananth Grama
2010	J	`jnl`	Functional characterization and topological modularity of molecular interaction networks. BMC Bioinform. Jayesh Pandey, Mehmet Koyutürk, Ananth Grama
2010	C	`conf`	Performance Models for the Spike Banded Linear System Solver. ISPDC Murat Manguoglu, Faisal Saied, Ahmed H. Sameh, Ananth Grama
2010	J	`jnl`	Special issue on Parallel Matrix Algorithms and Applications. Parallel Comput. Constantine Bekas, Pasqua D'Ambra, Ananth Grama, Yousef Saad, Petko Yanev
2010	J	`jnl`	Weighted Matrix Ordering and Parallel Banded Preconditioners for Iterative Linear System Solvers. SIAM J. Sci. Comput. Murat Manguoglu, Mehmet Koyutürk, Ahmed H. Sameh, Ananth Grama
2009	—	`ed.`	Contemporary Computing - Second International Conference, IC3 2009, Noida, India, August 17-19, 2009. Proceedings IC3 Sanjay Ranka, Srinivas Aluru, Rajkumar Buyya, Yeh-Ching Chung, Sumeet Dua, Ananth Grama, Sandeep K. S. Gupta, Rajeev Kumar, Vir V. Phoha
2009	J	`jnl`	Efficient tag detection in RFID systems. J. Parallel Distributed Comput. Bogdan Carbunar, Murali Krishna Ramanathan, Mehmet Koyutürk, Suresh Jagannathan, Ananth Grama
2009	—	`ch.`	Load Balancing for Parallel Optimization Techniques. Encyclopedia of Optimization Ananth Grama, Vipin Kumar
2008	Misc	`conf`	Annotating Pathways of Interaction Networks. Pacific Symposium on Biocomputing Jayesh Pandey, Mehmet Koyutürk, Wojciech Szpankowski, Ananth Grama
2008	C	`conf`	Functional coherence in domain interaction networks. ECCB Jayesh Pandey, Mehmet Koyutürk, Shankar Subramaniam, Ananth Grama
2008	Misc	`conf`	PHALANX: a graph-theoretic framework for test case prioritization. SAC Murali Krishna Ramanathan, Mehmet Koyutürk, Ananth Grama, Suresh Jagannathan
2008	B	`conf`	Protocol Inference Using Static Path Profiles. SAS Murali Krishna Ramanathan, Koushik Sen, Ananth Grama, Suresh Jagannathan
2008	Misc	`conf`	Scalable Data Collection in Sensor Networks. HiPC Asad Awan, Suresh Jagannathan, Ananth Grama
2008	J	`jnl`	Semantic indexing in structured peer-to-peer networks. J. Parallel Distributed Comput. Ronaldo A. Ferreira, Mehmet Koyutürk, Suresh Jagannathan, Ananth Grama
2007	J	`jnl`	Assessing Significance of Connectivity and Conservation in Protein Interaction Networks. J. Comput. Biol. Mehmet Koyutürk, Wojciech Szpankowski, Ananth Grama
2007	Misc	`conf`	Building Verifiable Sensing Applications Through Temporal Logic Specification. International Conference on Computational Science (1) Asad Awan, Ahmed H. Sameh, Suresh Jagannathan, Ananth Grama
2007	—	`conf`	Functional annotation of regulatory pathways. ISMB/ECCB (Supplement of Bioinformatics) Jayesh Pandey, Mehmet Koyutürk, Yohan Kim, Wojciech Szpankowski, Shankar Subramaniam, Ananth Grama
2007	J	`jnl`	Identifying Statistical Dependence in Genomic Sequences via Mutual Information Estimates. EURASIP J. Bioinform. Syst. Biol. Hasan Metin Aktulga, Ioannis Kontoyiannis, Leszek Alex Lyznik, Lukasz Szpankowski, Ananth Grama, Wojciech Szpankowski
2007	J	`jnl`	Identifying statistical dependence in genomic sequences via mutual information estimates CoRR Hasan Metin Aktulga, Ioannis Kontoyiannis, Leszek Alex Lyznik, Lukasz Szpankowski, Ananth Grama, Wojciech Szpankowski
2007	A	`conf`	Macroprogramming heterogeneous sensor networks using cosmos. EuroSys Asad Awan, Suresh Jagannathan, Ananth Grama
2007	A*	`conf`	Path-Sensitive Inference of Function Precedence Protocols. ICSE Murali Krishna Ramanathan, Ananth Grama, Suresh Jagannathan
2007	J	`jnl`	Randomized Protocols for Duplicate Elimination in Peer-to-Peer Storage Systems. IEEE Trans. Parallel Distributed Syst. Ronaldo A. Ferreira, Murali Krishna Ramanathan, Ananth Grama, Suresh Jagannathan
2007	J	`jnl`	Randomized leader election. Distributed Comput. Murali Krishna Ramanathan, Ronaldo A. Ferreira, Suresh Jagannathan, Ananth Grama, Wojciech Szpankowski
2007	—	`ch.`	Scalability of Parallel Programs. Handbook of Parallel Computing Ananth Grama, Vipin Kumar
2007	A*	`conf`	Static specification inference using predicate mining. PLDI Murali Krishna Ramanathan, Ananth Grama, Suresh Jagannathan
2006	B	`conf`	Assessing Significance of Connectivity and Conservation in Protein Interaction Networks. RECOMB Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski
2006	J	`jnl`	CONQUEST: A Coarse-Grained Algorithm for Constructing Summaries of Distributed Discrete Datasets. Algorithmica Jie Chi, Mehmet Koyutürk, Ananth Grama
2006	J	`jnl`	Detecting Conserved Interaction Patterns in Biological Networks. J. Comput. Biol. Mehmet Koyutürk, Yohan Kim, Shankar Subramaniam, Wojciech Szpankowski, Ananth Grama
2006	—	`conf`	Distributed Uniform Sampling in Unstructured Peer-to-Peer Networks. HICSS Asad Awan, Ronaldo A. Ferreira, Suresh Jagannathan, Ananth Grama
2006	J	`jnl`	Inferring functional information from domain co-evolution. Bioinform. Yohan Kim, Mehmet Koyutürk, Umut Topkara, Ananth Grama, Shankar Subramaniam
2006	J	`jnl`	Locality in structured peer-to-peer networks. J. Parallel Distributed Comput. Ronaldo A. Ferreira, Suresh Jagannathan, Ananth Grama
2006	J	`jnl`	Nonorthogonal decomposition of binary matrices for bounded-error data compression and analysis. ACM Trans. Math. Softw. Mehmet Koyutürk, Ananth Grama, Naren Ramakrishnan
2006	J	`jnl`	Pairwise Alignment of Protein Interaction Networks. J. Comput. Biol. Mehmet Koyutürk, Yohan Kim, Umut Topkara, Shankar Subramaniam, Wojciech Szpankowski, Ananth Grama
2006	J	`jnl`	Redundancy and coverage detection in sensor networks. ACM Trans. Sens. Networks Bogdan Carbunar, Ananth Grama, Jan Vitek, Octavian Carbunar
2006	A*	`conf`	Sieve: A Tool for Automatically Detecting Variations Across Program Versions. ASE Murali Krishna Ramanathan, Ananth Grama, Suresh Jagannathan
2006	Misc	`conf`	The Omni Macroprogramming Environment for Sensor Networks. International Conference on Computational Science (3) Asad Awan, Ahmed H. Sameh, Ananth Grama
2006	B	`conf`	Trace-Based Memory Aliasing Across Program Versions. FASE Murali Krishna Ramanathan, Suresh Jagannathan, Ananth Grama
2006	J	`jnl`	Unstructured peer-to-peer networks for sharing processor cycles. Parallel Comput. Asad Awan, Ronaldo A. Ferreira, Suresh Jagannathan, Ananth Grama
2005	J	`jnl`	Adaptive data structures for IP lookups. ACM J. Exp. Algorithmics Ioannis Ioannidis, Ananth Grama, Mikhail J. Atallah
2005	J	`jnl`	Compression, Clustering, and Pattern Discovery in Very High-Dimensional Discrete-Attribute Data Sets. IEEE Trans. Knowl. Data Eng. Mehmet Koyutürk, Ananth Grama, Naren Ramakrishnan
2005	Misc	`conf`	High-Fidelity Simulation of Large-Scale Structures. International Conference on Computational Science (2) Christoph Hoffmann, Ahmed H. Sameh, Ananth Grama
2005	J	`jnl`	Level compressed DAGs for lookup tables. Comput. Networks Ioannis Ioannidis, Ananth Grama
2005	B	`conf`	Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution. RECOMB Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski
2005	—	`conf`	Randomized Protocols for Duplicate Elimination in Peer-to-Peer Storage Systems. Peer-to-Peer Computing Ronaldo A. Ferreira, Murali Krishna Ramanathan, Ananth Grama, Suresh Jagannathan
2005	B	`conf`	Redundant reader elimination in RFID systems. SECON Bogdan Carbunar, Murali Krishna Ramanathan, Mehmet Koyutürk, Christoph Hoffmann, Ananth Grama
2005	—	`conf`	Search with Probabilistic Guarantees in Unstructured Peer-to-Peer Networks. Peer-to-Peer Computing Ronaldo A. Ferreira, Murali Krishna Ramanathan, Asad Awan, Ananth Grama, Suresh Jagannathan
2004	—	`conf`	A Secure Crediting Protocol for Hybrid Cellular and Ad-Hoc Networks. ICETE (3) Bogdan Carbunar, Ioannis Ioannidis, Ananth Grama, Jan Vitek
2004	C	`conf`	A public key algorithm for ad-hoc networks. IPCCC Bogdan Carbunar, Ananth Grama, Jan Vitek
2004	—	`conf`	An efficient algorithm for detecting frequent subgraphs in biological networks. ISMB/ECCB (Supplement of Bioinformatics) Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski
2004	—	`conf`	Biclustering Gene-Feature Matrices for Statistically Significant Dense Patterns. CSB Mehmet Koyutürk, Wojciech Szpankowski, Ananth Grama
2004	A	`conf`	Conquest: A Distributed Tool for Constructing Summaries of High-Dimensional Discrete Attribute Data Sets. SDM Jie Chi, Mehmet Koyutürk, Ananth Grama
2004	B	`conf`	Coverage preserving redundancy elimination in sensor networks. SECON Bogdan Carbunar, Ananth Grama, Jan Vitek, Octavian Carbunar
2004	B	`conf`	Distributed and Dynamic Voronoi Overlays for Coverage Detection and Distributed Hash Tables in Ad-Hoc Networks. ICPADS Bogdan Carbunar, Ananth Grama, Jan Vitek
2004	B	`conf`	Enhancing Locality in Structured Peer-to-Peer Networks. ICPADS Ronaldo A. Ferreira, Suresh Jagannathan, Ananth Grama
2004	A	`conf`	Extended Consistent Hashing: An Efficient Framework for Object Location. ICDCS Shan Lei, Ananth Grama
2004	A	`conf`	Impact of far-field interactions on performance of multipole-based preconditioners for sparse linear systems. ICS Ananth Grama, Vivek Sarin
2004	Misc	`conf`	Model Reduction of Large-Scale Dynamical Systems. International Conference on Computational Science Athanasios C. Antoulas, Danny C. Sorensen, Kyle A. Gallivan, Paul Van Dooren, Ananth Grama, Christoph Hoffmann, Ahmed H. Sameh
2004	Misc	`conf`	Parallel Performance of Hierarchical Multipole Algorithms for Inductance Extraction. HiPC Hemant Mahawar, Vivek Sarin, Ananth Grama
2004	Misc	`conf`	Plethora: An EfficientWide-Area Storage System. HiPC Ronaldo A. Ferreira, Ananth Grama, Suresh Jagannathan
2003	A*	`conf`	Adaptive Data Structures for IP Lookups. INFOCOM Ioannis Ioannidis, Ananth Grama, Mikhail J. Atallah
2003	—	`conf`	Algorithms for Bounded-Error Correlation of High Dimensional Data in Microarray Experiments. CSB Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski
2003	—	`conf`	An Efficient Protocol for Yao?s Millionaires? Problem. HICSS Ioannis Ioannidis, Ananth Grama
2003	B	`conf`	An IP address based caching scheme for peer-to-peer networks. GLOBECOM Ronaldo A. Ferreira, Ananth Grama, Suresh Jagannathan
2003	J	`jnl`	Multipole-based preconditioners for large sparse linear systems. Parallel Comput. Sreekanth R. Sambavaram, Vivek Sarin, Ahmed H. Sameh, Ananth Grama
2003	A*	`conf`	PROXIMUS: a framework for analyzing very high dimensional discrete-attributed datasets. KDD Mehmet Koyutürk, Ananth Grama
2003	A*	`conf`	Spectral LPM: An Optimal Locality-Preserving Mapping using the Spectral (not Fractal) Order. ICDE Mohamed F. Mokbel, Walid G. Aref, Ananth Grama
2002	J	`jnl`	2D-pattern matching image and video compression: theory, algorithms, and experiments. IEEE Trans. Image Process. Marc Alzina, Wojciech Szpankowski, Ananth Grama
2002	B	`conf`	A Secure Protocol for Computing Dot-Products in Clustered and Distributed Environments. ICPP Ioannis Ioannidis, Ananth Grama, Mikhail J. Atallah
2002	—	`conf`	Algebraic Techniques for Analysis of Large Discrete-Valued Datasets. PKDD Mehmet Koyutürk, Ananth Grama, Naren Ramakrishnan
2002	B	`conf`	MOBY - A Mobile Peer-to-Peer Service and Data Network. ICPP Tzvetan Horozov, Ananth Grama, Venu Vasudevan, Sean Landis
2002	—	`conf`	Oceanus: A Distributed Web-Based Framework for Execution of Genetic Algorithms. GECCO Late Breaking Papers Jie Chi, Alok R. Chaturvedi, Ananth Grama, Shailendra Raj Mehta
2002	B	`conf`	Semi-discrete Matrix Transforms (SDD) for Image and Video Compression. DCC Sacha Zyto, Ananth Grama, Wojciech Szpankowski
2001	Misc	`conf`	Architecture Independent Analysis of Parallel Programs. International Conference on Computational Science (2) Ananth Grama, Vipin Kumar, Sanjay Ranka, Vineet Singh
2001	J	`jnl`	Compression of particle data from hierarchical approximate methods. ACM Trans. Math. Softw. Dow-Yung Yang, Ananth Grama, Vivek Sarin, Naren Ramakrishnan
2001	J	`jnl`	Mining scientific data. Adv. Comput. Naren Ramakrishnan, Ananth Grama
2001	J	`jnl`	Privacy Risks in Recommender Systems. IEEE Internet Comput. Naren Ramakrishnan, Benjamin J. Keller, Batul J. Mirza, Ananth Grama, George Karypis
2001	B	`conf`	Real-Time Decompression of Streaming Video Using Mobile Code. Data Compression Conference Ananth Grama, David Meyer, Wojciech Szpankowski
2001	J	`jnl`	When being Weak is Brave: Privacy in Recommender Systems CoRR Naren Ramakrishnan, Benjamin J. Keller, Batul J. Mirza, Ananth Grama, George Karypis
2000	J	`jnl`	Improving Error Bounds for Multipole-Based Treecodes. SIAM J. Sci. Comput. Ananth Grama, Vivek Sarin, Ahmed H. Sameh
2000	B	`conf`	Summary Structures for Frequency Queries on Large Transaction Sets. Data Compression Conference Dow-Yung Yang, Akshay Johar, Ananth Grama, Wojciech Szpankowski
1999	B	`conf`	2D-Pattern Matching Image and Video Compression. Data Compression Conference Marc Alzina, Wojciech Szpankowski, Ananth Grama
1999	A	`conf`	Bounded-Error Compression of Particle Data from Hierarchical Approximate Methods. SC Dow-Yung Yang, Ananth Grama, Vivek Sarin
1999	J	`jnl`	Data Mining: From Serendipity to Science - Guest Editors' Introduction. Computer Naren Ramakrishnan, Ananth Grama
1999	J	`jnl`	State of the Art in Parallel Search Techniques for Discrete Optimization Problems. IEEE Trans. Knowl. Data Eng. Ananth Grama, Vipin Kumar
1998	A	`conf`	Analyzing the Error Bounds of Multipole-Based Treecodes. SC Vivek Sarin, Ananth Grama, Ahmed H. Sameh
1998	Misc	`conf`	Improving error bounds for multipole-based treecodes. HiPC Ananth Grama, Vivek Sarin, Ahmed H. Sameh
1998	J	`jnl`	Parallel Hierarchical Solvers and Preconditioners for Boundary Element Methods. SIAM J. Sci. Comput. Ananth Grama, Vipin Kumar, Ahmed H. Sameh
1998	J	`jnl`	Scalable Parallel Formulations of the Barnes-Hut Method for Parallel Comput. Ananth Grama, Vipin Kumar, Ahmed H. Sameh
1997	—	`conf`	Role of Message-Passing in Performance Oriented Parallel Programming. PP Vipin Kumar, George Karypis, Ananth Grama
1996	A	`conf`	Parallel Hierarchical Solvers and Preconditioners for Boundary Element Methods. SC Ananth Grama, Vipin Kumar, Ahmed H. Sameh
1995	—	`conf`	Fast volume rendering using an efficient, scalable parallel formulation of the shear-warp algorithm. PRS Minesh B. Amin, Ananth Grama, Vineet Singh
1995	—	`conf`	N-Body Simulations Using Message Passsing Parallel Computers. PP Ananth Grama, Vipin Kumar, Ahmed H. Sameh
1995	A	`conf`	Parallel Matrix-Vector Product Using Approximate Hierarchical Methods. SC Ananth Grama, Vipin Kumar, Ahmed H. Sameh
1995	J	`jnl`	Parallel Search Algorithms for Discrete Optimization Problems. INFORMS J. Comput. Ananth Grama, Vipin Kumar
1994	—	`book`	Introduction to Parallel Computing. Vipin Kumar, Ananth Grama, Anshul Gupta, George Karypis
1994	J	`jnl`	Scalable Load Balancing Techniques for Parallel Computers. J. Parallel Distributed Comput. Vipin Kumar, Ananth Grama, Nageshwara Rao Vempaty
1994	A	`conf`	Scalable parallel formulations of the Barnes-Hut method for SC Ananth Grama, Vipin Kumar, Ahmed H. Sameh
1993	J	`jnl`	Isoefficiency: measuring the scalability of parallel algorithms and architectures. IEEE Parallel Distributed Technol. Syst. Appl. Ananth Grama, Anshul Gupta, Vipin Kumar
1992	A	`conf`	Scalability Analysis of Partitioning Strategies for Finite Element Graphs: A Summary of Results. SC Ananth Grama, Vipin Kumar