Ana-Nicoleta Bondar

11 papers Journal 10Unranked 1
YearRankTypeTitle / Venue / Authors
2023 J jnl
Fentanyl and the Fluorinated Fentanyl Derivative NFEPP Elicit Distinct Hydrogen-Bond Dynamics of the Opioid Receptor.
J. Chem. Inf. Model.
Samo Lesnik, Urban Bren, Tatiana Domratcheva, Ana-Nicoleta Bondar
2021 J jnl
C-Graphs Tool with Graphical User Interface to Dissect Conserved Hydrogen-Bond Networks: Applications to Visual Rhodopsins.
J. Chem. Inf. Model.
Éva Bertalan, Elena Lesca, Gebhard F. X. Schertler, Ana-Nicoleta Bondar
2021 J jnl
CHARMM Force-Field Parameters for Morphine, Heroin, and Oliceridine, and Conformational Dynamics of Opioid Drugs.
J. Chem. Inf. Model.
Thomas Giannos, Samo Lesnik, Urban Bren, Milan Hodoscek, Tatiana Domratcheva, Ana-Nicoleta Bondar
2021 J jnl
Interactive Interface for Graph-Based Analyses of Dynamic H-Bond Networks: Application to Spike Protein S.
J. Chem. Inf. Model.
Malte Siemers, Ana-Nicoleta Bondar
2020 J jnl
Cover Image.
J. Comput. Chem.
Oskar Klaja, James A. Frank, Dirk Trauner, Ana-Nicoleta Bondar
2020 J jnl
Potential Energy Function for Fentanyl-Based Opioid Pain Killers.
J. Chem. Inf. Model.
Samo Lesnik, Milan Hodoscek, Urban Bren, Christoph Stein, Ana-Nicoleta Bondar
2020 J jnl
Potential energy function for a photo-switchable lipid molecule.
J. Comput. Chem.
Oskar Klaja, James A. Frank, Dirk Trauner, Ana-Nicoleta Bondar
2019 J jnl
Using Graphs of Dynamic Hydrogen-Bond Networks To Dissect Conformational Coupling in a Protein Motor.
J. Chem. Inf. Model.
Konstantina Karathanou, Ana-Nicoleta Bondar
2018 J jnl
Revised CHARMM force field parameters for iron-containing cofactors of photosystem II.
J. Comput. Chem.
Suliman Adam, Michaela Knapp-Mohammady, Jun Yi, Ana-Nicoleta Bondar
2013 J jnl
Exploring cavity dynamics in biomolecular systems.
BMC Bioinform.
Norbert Lindow, Daniel Baum, Ana-Nicoleta Bondar, Hans-Christian Hege
2012 — conf
Dynamic channels in biomolecular systems: Path analysis and visualization.
BioVis
Norbert Lindow, Daniel Baum, Ana-Nicoleta Bondar, Hans-Christian Hege