Amir A. Amini - RankMe

82 papers A* 1A 3Journal 26Unranked 51

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Position Paper: Artificial Intelligence in Medical Image Analysis: Advances, Clinical Translation, and Emerging Frontiers. IEEE J. Biomed. Health Informatics Andreas S. Panayides, Hao Chen, Nenad D. Filipovic, Tijana Geroski, Junlin Hou, Karim Lekadir, Kostas Marias, George K. Matsopoulos, Giorgos Papanastasiou, Pinaki Sarder, Georgia D. Tourassi, Sotirios A. Tsaftaris, Huazhu Fu, Efthyvoulos C. Kyriacou, Christos P. Loizou, Michalis E. Zervakis, Joel H. Saltz, Farah E. Shamout, Ken C. L. Wong, Jianhua Yao, Amir A. Amini, Dimitrios I. Fotiadis, Constantinos S. Pattichis, Marios S. Pattichis
2025	J	`jnl`	LoRA-fine-tuned Large Vision Models for Automated Assessment of Post-SBRT Lung Injury. CoRR M. Bolhassani, Benjamin Veasey, Emily C. Daugherty, Samuel Keltner, Nitin Kumar, Neal Dunlap, Amir A. Amini
2024	—	`conf`	Harnessing Convolutional Neural Networks for Diagnosing Post-SBRT Radiation-Induced Lung Injury From X-Ray CT. ISBI Ben P. Veasey, Aryan Ghazipour, Tyler Settle, Emily C. Daugherty, Samuel Keltner, Nitin Kumar, James Ververs, Michael Farris, Neal Dunlap, Amir A. Amini
2024	—	`conf`	PI-GNN: Physics-Informed Graph Neural Network for Super-Resolution of 4D Flow MRI. ISBI Amirkhosro Kazemi, Isaac Josh Abecassis, Amir A. Amini
2024	—	`conf`	Parameter-Efficient Fine-Tuning of DINOV2 Vision Transformers for Lung Nodule Classification. ISBI Benjamin Veasey, Amir A. Amini
2023	—	`conf`	Estimation of hemodynamic parameters with deep-learning-based super-resolved 4D flow MRI velocity data. Biomedical Applications in Molecular, Structural, and Functional Imaging Amirkhosro Kazemi, Sean Callahan, Marcus F. Stoddard, Amir A. Amini
2023	—	`conf`	Performance of a bank of 2D efficient-nets for benign/malignant classification of lung nodules in 3D thoracic x-ray CT scans. Biomedical Applications in Molecular, Structural, and Functional Imaging Tyler Settle, Benjamin Veasey, Albert Seow, Amir A. Amini
2023	—	`conf`	Survival Outcome Prediction for Stereotactic Body Radiation Therapy of Lung Cancer from Post-RT Ct Images with RNN/CNN Deep Learning. ISBI Aryan Ghazipour, Tyler Settle, Benjamin Veasey, Emily C. Daugherty, Samuel Keltner, Nitin Kumar, James Ververs, Michael Farris, Neal Dunlap, Amir A. Amini
2023	—	`conf`	TKE-Net: Deep Learning for Estimation of Super-Resolved Turbulent Kinetic Energy Maps from 4D-Flow MRI Data. ISBI Amirkhosro Kazemi, Marcus F. Stoddard, Amir A. Amini
2022	J	`jnl`	FlowRAU-Net: Accelerated 4D Flow MRI of Aortic Valvular Flows With a Deep 2D Residual Attention Network. IEEE Trans. Biomed. Eng. Ruponti Nath, Sean Callahan, Marcus F. Stoddard, Amir A. Amini
2022	—	`conf`	Reduced-order modeling of 4D flow MRI and CFD in stenotic flow using Proper Orthogonal Decomposition (POD) and Dynamic Mode Decomposition (DMD). Biomedical Applications in Molecular, Structural, and Functional Imaging Amirkhosro Kazemi, Marcus F. Stoddard, Amir A. Amini
2021	—	`conf`	3D U-net for registration of lung nodules in longitudinal CT scans. Computer-Aided Diagnosis Aryan Ghazipour, Benjamin Veasey, Albert Seow, Amir A. Amini
2021	—	`conf`	4D flow MRI and CFD simulations of pulsatile flow in a phantom model of arterial stenosis: visualizing the vortex dynamics. Biomedical Applications in Molecular, Structural, and Functional Imaging Amirkhosro Kazemi, Ruponti Nath, M. J. Negahdar, Marcus Stodddard, Amir A. Amini
2021	—	`conf`	A 1D encoder-decoder deep network for pressure estimation from 4D flow MRI: in-vitro experiments. Biomedical Applications in Molecular, Structural, and Functional Imaging Ruponti Nath, Amirkhosro Kazemi, Sean Callahan, M. J. Negahdar, Marcus F. Stoddard, Amir A. Amini
2021	—	`conf`	Joint Learning for Deformable Registration and Malignancy Classification of Lung Nodules. ISBI Aryan Ghazipour, Benjamin Veasey, Albert Seow, Amir A. Amini
2021	J	`jnl`	Lung Nodule Malignancy Prediction in Sequential CT Scans: Summary of ISBI 2018 Challenge. IEEE Trans. Medical Imaging Yoganand Balagurunathan, Andrew Beers, Michael F. McNitt-Gray, Lubomir M. Hadjiiski, Sandy Napel, Dmitry B. Goldgof, Gustavo Pérez, Pablo Arbeláez, Alireza Mehrtash, Tina Kapur, Ehwa Yang, Jung Won Moon, Gabriel Bernardino Perez, Ricard Delgado-Gonzalo, Mohammad Mehdi Farhangi, Amir A. Amini, Renkun Ni, Xue Feng, Aditya Bagari, Kiran Vaidhya, Benjamin Veasey, Wiem Safta, Hichem Frigui, Joseph Enguehard, Ali Gholipour, Laura Silvana Castillo, Laura Alexandra Daza, Paul F. Pinsky, Jayashree Kalpathy-Cramer, Keyvan Farahani
2020	—	`conf`	3D U-Net for segmentation of pulmonary nodules in volumetric CT scans from multi-annotator truth estimation. Computer-Aided Diagnosis William Funke, Benjamin Veasey, Jacek M. Zurada, Hichem Frigui, Amir A. Amini
2020	J	`jnl`	AI in Medical Imaging Informatics: Current Challenges and Future Directions. IEEE J. Biomed. Health Informatics Andreas S. Panayides, Amir A. Amini, Nenad D. Filipovic, Ashish Sharma, Sotirios A. Tsaftaris, Alistair A. Young, David J. Foran, Nhan Do, Spyretta Golemati, Tahsin M. Kurç, Kun Huang, Konstantina S. Nikita, Ben P. Veasey, Michalis E. Zervakis, Joel H. Saltz, Constantinos S. Pattichis
2020	—	`conf`	Accelerated Phase Contrast Magnetic Resonance Imaging via Deep Learning. ISBI Ruponti Nath, Sean Callahan, Narayana Singam, Marcus F. Stoddard, Amir A. Amini
2020	J	`jnl`	Editorial Special Issue on "AI-Driven Informatics, Sensing, Imaging and Big Data Analytics for Fighting the COVID-19 Pandemic". IEEE J. Biomed. Health Informatics Amir A. Amini, Wei Chen, Giancarlo Fortino, Ye Li, Yi Pan, May Dongmei Wang
2020	—	`conf`	Lung Nodule Malignancy Classification Based ON NLSTx Data. ISBI Benjamin Veasey, Mohammad Mehdi Farhangi, Hichem Frigui, Justin Broadhead, Michael Dahle, Aria Pezeshk, Albert Seow, Amir A. Amini
2019	—	`conf`	A comparative study of graph search algorithms for segmenting coronary arteries from cine angiography. Biomedical Applications in Molecular, Structural, and Functional Imaging Benjamin Veasey, Shahab Ghafghazi, Amir A. Amini
2019	—	`conf`	An MR compatible aortic arch phantom with calcific polymeric valves. Biomedical Applications in Molecular, Structural, and Functional Imaging Alex Henn, Sean Callahan, Michael Kendrick, Arash Kheradvar, Amir A. Amini
2019	—	`conf`	Multiple Instance Learning for Malignant vs. Benign Classification of Lung Nodules in Thoracic Screening Ct Data. ISBI Wiem Safta, Mohammad Mehdi Farhangi, Benjamin Veasey, Amir A. Amini, Hichem Frigui
2018	—	`conf`	3D segmentation of the ascending and descending aorta from CT data via graph-cuts. Biomedical Applications in Molecular, Structural, and Functional Imaging Jungwon Cha, Alex Henn, Marcus F. Stoddard, Amir A. Amini
2018	—	`conf`	4D Dual-Venc Spiral Flow. EMBC Sean Callahan, Alex Henn, Michael Kendrick, Hui Wang, M. J. Negahdar, Arash Kheradvar, Marcus F. Stoddard, Amir A. Amini
2018	—	`conf`	Statistical correlation of CT ventilation imaging and V/Q spect in patients with lung cancer. ISBI Jung won Cha, Neal Dunlap, Amir A. Amini
2017	J	`jnl`	3-D Active Contour Segmentation Based on Sparse Linear Combination of Training Shapes (SCoTS). IEEE Trans. Medical Imaging Mohammad Mehdi Farhangi, Hichem Frigui, Albert Seow, Amir A. Amini
2017	—	`conf`	Volumetric analysis of respiratory gated whole lung and liver CT data with motion-constrained graph cuts segmentation. EMBC Jung won Cha, Mohammad Mehdi Farhangi, Neal Dunlap, Amir A. Amini
2016	—	`conf`	3D segmentation of lung CT data with graph-cuts: analysis of parameter sensitivities. Biomedical Applications in Molecular, Structural, and Functional Imaging Jung won Cha, Neal Dunlap, Brian Wang, Amir A. Amini
2016	—	`conf`	4D lung tumor segmentation via shape prior and motion cues. EMBC Jung won Cha, Mohammad Mehdi Farhangi, Neal Dunlap, Amir A. Amini
2016	—	`conf`	Incorporating shape prior into active contours with a sparse linear combination of training shapes: Application to corpus callosum segmentation. EMBC Mohammad Mehdi Farhangi, Hichem Frigui, Robert Bert, Amir A. Amini
2014	J	`jnl`	Tissue Doppler Imaging Optical Flow (TDIOF): A Combined B-Mode and Tissue Doppler Approach for Cardiac Motion Estimation in Echocardiographic Images. IEEE Trans. Biomed. Eng. Vahid Tavakoli, Nirman Bhatia, Rita A. Longaker, Marcus F. Stoddard, Amir A. Amini
2013	J	`jnl`	A survey of shaped-based registration and segmentation techniques for cardiac images. Comput. Vis. Image Underst. Vahid Tavakoli, Amir A. Amini
2013	—	`conf`	Analysis of 3D cardiac deformations with 3D SinMod. EMBC Hui Wang, Christian T. Stoeck, Sebastian Kozerke, Amir A. Amini
2013	—	`conf`	Assessment of flow and hemodynamics in the carotid artery using a reduced TE 4D flow spiral phase-contrast MRI. EMBC Mo Kadbi, Mohammadreza Negahdar, Melanie Traughber, Peter Martin, Amir A. Amini
2013	—	`conf`	Comparison of indices of regional lung function from 4-D X-ray CT: Jacobian vs. strain of deformation. ISBI Mohammadreza Negahdar, Neal Dunlap, Albert Zacarias, Ali Cahid Civelek, Shiao Y. Woo, Amir A. Amini
2013	—	`conf`	Noninvasive 3D pressure calculation from PC-MRI via non-iterative harmonics-based orthogonal projection: Constant flow experiment. EMBC M. J. Negahdar, Mo Kadbi, J. Cha, Juan R. Cebral, Amir A. Amini
2012	—	`conf`	A biventricular multimodal (MRI/ultrasound) cardiac phantom. EMBC Vahid Tavakoli, M. J. Negahdar, Michael Kendrick, Motaz Alshaher, Marcus F. Stoddard, Amir A. Amini
2012	—	`conf`	A novel phase-corrected 3D cine ultra-short te (UTE) phase-contrast MRI technique. EMBC Mo Kadbi, Hui Wang, M. J. Negahdar, Lizette Warner, Melanie Traughber, Peter Martin, Amir A. Amini
2012	J	`jnl`	Cardiac Motion and Deformation Recovery From MRI: A Review. IEEE Trans. Medical Imaging Hui Wang, Amir A. Amini
2012	—	`conf`	Effect of Venc on accuracy of velocity profiles in multi-slice phase-contrast MR imaging of stenotic flow. ISBI Mohammadreza Negahdar, Jong Cha, Mostafa Shakeri, Michael Kendrick, Motaz Alshaher, Iman Khodarahimi, M. K. Sharp, A. Yancey, J. Heidenreich, Amir A. Amini
2012	—	`conf`	Regional lung strains via a volumetric mass conserving optical flow model. ISBI Mohammadreza Negahdar, Amir A. Amini
2012	—	`conf`	Validation of 3D ultra-short TE (UTE) Phase-Contrast MRI for imaging of steady flow: Initial phantom experiments. EMBC Mo Kadbi, M. J. Negahdar, Jung won Cha, Melanie Traughber, Peter Martin, Amir A. Amini
2011	—	`conf`	A multi-scale non-linear vessel enhancement technique. EMBC Behnaz Abdollahi, Ayman El-Baz, Amir A. Amini
2011	—	`conf`	An improved real-time cine Late Gadolinium Enhancement (LGE) imaging method at 3T. EMBC Mo Kadbi, Melanie Kotys, Motaz Alshaher, Stefan E. Fischer, Amir A. Amini
2011	—	`conf`	Estimation of affine motion from projection data using a mass conservation model. EMBC Mohammadreza Negahdar, Amir A. Amini
2011	—	`conf`	Multi-scale optical flow including normalized mutual information for planar deformable lung motion estimation from 4D CT. EMBC Mohammadreza Negahdar, Amir A. Amini
2011	—	`conf`	Orthogonal CSPAMM (OCSPAMM) MR tagging for imaging ventricular wall motion. EMBC Hui Wang, Mo Kadbi, Melanie Kotys, Mehmet Ersoy, George P. Chatzimavroudis, Randolph M. Setser, Motaz Alshaher, Stefan E. Fischer, Amir A. Amini
2011	—	`conf`	Planar deformable motion estimation incorporating mass conservation and image gradient constancy. ISBI Mohammadreza Negahdar, Amir A. Amini
2011	—	`conf`	Rapid flow quantification in iliac arteries with spiral phase-contrast MRI. EMBC M. J. Negahdar, Mo Kadbi, Melanie Kotys, Motaz Alshaher, Stefan E. Fischer, Amir A. Amini
2007	—	`conf`	Imaging and Analysis for Determination of Cardiovascular Mechanics. ISBI Amir A. Amini, Jian Chen, Yuehuan Wang
2006	J	`jnl`	Biventricular myocardial strains via nonrigid registration of AnFigatomical NURBS models. IEEE Trans. Medical Imaging Nicholas J. Tustison, Amir A. Amini
2005	—	`conf`	Integrable Pressure Gradients via Harmonics-Based Orthogonal Projection. IPMI Yuehuan Wang, Amir A. Amini
2005	J	`jnl`	Vascular Imaging. IEEE Trans. Medical Imaging Alejandro F. Frangi, Amir A. Amini, Elizabeth Bullitt
2004	—	`conf`	Biventricular Myocardial Kinematics Based on Tagged MRI from Anatomical NURBS Models. CVPR (2) Nicholas J. Tustison, Dana Abendschein, Amir A. Amini
2004	J	`jnl`	Quantifying 3-D vascular structures in MRA images using hybrid PDE and geometric deformable models. IEEE Trans. Medical Imaging Jian Chen, Amir A. Amini
2003	J	`jnl`	Myocardial kinematics from tagged MRI based on a 4-D B-spline model. IEEE Trans. Biomed. Eng. Nicholas J. Tustison, Victor G. Dávila-Román, Amir A. Amini
2003	J	`jnl`	Regularization of Flow Streamlines in Multislice Phase-Contrast MRI. IEEE Trans. Medical Imaging Nasser Fatouraee, Amir A. Amini
2002	J	`jnl`	A MAP Framework for Tag Line Detection in SPAMM Data Using Markov Random Fields on the B-Spline Solid. IEEE Trans. Medical Imaging Yasheng Chen, Amir A. Amini
2002	—	`conf`	Myocardial Strain Imaging with Tagged MRI. ICPR (1) Nicholas J. Tustison, Dana Abendschein, Victor G. Dávila-Román, Amir A. Amini
2001	J	`jnl`	Fast LV Motion Estimation Using Subspace Approximation Techniques. IEEE Trans. Medical Imaging Yu-Ping Wang, Yasheng Chen, Amir A. Amini
2001	J	`jnl`	Tag Surface Reconstruction and Tracking of Myocardial Beads from SPAMM-MRI with Parametric B-Spline Surfaces. IEEE Trans. Medical Imaging Amir A. Amini, Yasheng Chen, Mohamed Elayyadi, Petia Radeva
1999	A	`conf`	Comparison of Land-Mark-Based and Curve-Based Thin-Plate Warps for Analysis of Left-Ventricular Motion from Tagged MRI. MICCAI Amir A. Amini, Yasheng Chen, Dana Abendschein
1999	—	`conf`	Four-Dimensional LV Tissue Tracking from Tagged MRI with a 4D B-Spline Model. IPMI Jiantao Huang, Amir A. Amini
1999	J	`jnl`	Spatio-Temporal Tracking of Myocardial Deformation with a 4D B-Spline Model from Tagged MRI. IEEE Trans. Medical Imaging Jiantao Huang, Dana Abendschein, Victor G. Dávila-Román, Amir A. Amini
1998	—	`conf`	Anatomical Object Volumes from Deformable B-spline Surface Models. ICIP (1) Jiantao Huang, Amir A. Amini
1998	J	`jnl`	Coupled B-Snake Grids and Constrained Thin-Plate Splines for Analysis of 2D Tissue Deformations from Tagged MRI. IEEE Trans. Medical Imaging Amir A. Amini, Yasheng Chen, Rupert W. Curwen, Vaidy Mani, Jean Sun
1998	A	`conf`	Dense 2d Displacement Reconstruction from SPAMM-MRI with Constrained Elastic Splines: Implementation and Validation. MICCAI Amir A. Amini, Yasheng Chen, Jean Sun, Vaidy Mani
1998	—	`conf`	Flexible Shapes for Segmentation and Tracking of Cardiovascular Data. ICIP (2) Amir A. Amini, Jiantao Huang, Andreas K. Klein, Petia Radeva, Mohamed Elayyadi
1998	A	`conf`	Measurement of 3D Motion of Myocardial Material Points from Explicit B-Surface Reconstruction of Tagged MRI Data. MICCAI Amir A. Amini, Petia Radeva, Mohamed Elayyadi, Debiao Li
1997	J	`jnl`	Biomedical Image Analysis. Comput. Vis. Image Underst. Amir A. Amini, Fred L. Bookstein, David C. Wilson
1997	J	`jnl`	Deformable B-Solids and Implicit Snakes for 3D Localization and Tracking of SPAMM MRI Data. Comput. Vis. Image Underst. Petia Radeva, Amir A. Amini, Jiantao Huang
1997	J	`jnl`	Quantitative Coronary Angiography with Deformable Spline Models. IEEE Trans. Medical Imaging Andreas K. Klein, Forester Lee, Amir A. Amini
1996	—	`conf`	Snakes and Splines for Tracking Non-Rigid Heart Motion. ECCV (2) Amir A. Amini, Rupert W. Curwen, John C. Gore
1994	—	`conf`	A Scalar Function Formulation for Optical Flow. ECCV (1) Amir A. Amini
1992	J	`jnl`	Bending and stretching models for LV wall motion analysis from curves and surfaces. Image Vis. Comput. Amir A. Amini, James S. Duncan
1991	—	`conf`	Non-Rigid Motion Models for Tracking the Left Ventricular Wall. IPMI Amir A. Amini, R. L. Owen, P. Anandan, James S. Duncan
1990	J	`jnl`	Using Dynamic Programming for Solving Variational Problems in Vision. IEEE Trans. Pattern Anal. Mach. Intell. Amir A. Amini, Terry E. Weymouth, Ramesh C. Jain
1990	—	`—`	Using dynamic programming for solving variational problems in vision: Applications involving deformable models for contours and surfaces. Amir A. Amini
1989	J	`jnl`	A parallel algorithm for determining two-dimensional object positions using incomplete information about their boundaries. Pattern Recognit. Amir A. Amini, Terry E. Weymouth, David J. Anderson
1988	A*	`conf`	Using Dynamic Programming For Minimizing The Energy Of Active Contours In The Presence Of Hard Constraints. ICCV Amir A. Amini, Saeid Tehrani, Terry E. Weymouth