Allen G. Rodrigo

16 papers B 2Journal 14
YearRankTypeTitle / Venue / Authors
2025 J jnl
A digital DNA system favours the superiority of unidirectional inheritance over 'Lamarckian' inheritance.
PLoS Comput. Biol.
Aswathi Shiju, Samantha D. M. Arras, Allen G. Rodrigo, Anthony M. Poole
2025 J jnl
Extending the Hegselmann-Krause Model of Opinion Dynamics to include AI Oracles.
CoRR
Allen G. Rodrigo
2024 J jnl
Mugen-UMAP: UMAP visualization and clustering of mutated genes in single-cell DNA sequencing data.
BMC Bioinform.
Teng Li, Yiran Zou, Xianghan Li, Thomas K. F. Wong, Allen G. Rodrigo
2024 J jnl
ViPRA-Haplo: De Novo Reconstruction of Viral Populations Using Paired End Sequencing Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Weiling Li, Raunaq Malhotra, Steven H. Wu, Manjari Jha, Allen G. Rodrigo, Mary Poss, Raj Acharya
2021 J jnl
An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes.
PLoS Comput. Biol.
Thomas K. F. Wong, Teng Li, Louis Ranjard, Steven H. Wu, Jeet Sukumaran, Allen G. Rodrigo
2020 J jnl
Correction to: Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage.
BMC Bioinform.
Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo
2019 J jnl
Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage.
BMC Bioinform.
Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo
2018 J jnl
HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrations.
BMC Bioinform.
Thomas K. F. Wong, Louis Ranjard, Yu Lin, Allen G. Rodrigo
2015 J jnl
Estimation of evolutionary parameters using short, random and partial sequences from mixed samples of anonymous individuals.
BMC Bioinform.
Steven H. Wu, Allen G. Rodrigo
2015 J jnl
Neutral Models of Microbiome Evolution.
PLoS Comput. Biol.
Qinglong Zeng, Jeet Sukumaran, Steven H. Wu, Allen G. Rodrigo
2012 J jnl
A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels.
BMC Bioinform.
Steven H. Wu, Michael A. Black, Robyn A. North, Allen G. Rodrigo
2009 J jnl
A Statistical Model to Identify Differentially Expressed Proteins in 2D PAGE Gels.
PLoS Comput. Biol.
Steven H. Wu, Michael A. Black, Robyn A. North, Kelly R. Atkinson, Allen G. Rodrigo
2007 J jnl
SQUINT: a multiple alignment program and editor.
Bioinform.
Matthew Goode, Allen G. Rodrigo
2005 J jnl
Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type-1.
J. Bioinform. Comput. Biol.
Peter L. Meintjes, Allen G. Rodrigo
2004 B conf
A Brief Introduction to the Phylogentics Analysis Library V1.5.
APBC
Matthew Goode, Korbinian Strimmer, Alexei J. Drummond, Ed Buckler, Allen G. Rodrigo
2004 B conf
Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type 1.
APBC
Peter L. Meintjes, Allen G. Rodrigo