Alicia Oshlack

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2024 J jnl
Damsel: analysis and visualisation of DamID sequencing in R.
Bioinform.
Caitlin G. Page, Andrew Lonsdale, Katrina A. Mitchell, Jan Schröder, Kieran F. Harvey, Alicia Oshlack
2021 J jnl
Detecting copy number alterations in RNA-Seq using SuperFreq.
Bioinform.
Christoffer Flensburg, Alicia Oshlack, Ian J. Majewski
2020 J jnl
SuperFreq: Integrated mutation detection and clonal tracking in cancer.
PLoS Comput. Biol.
Christoffer Flensburg, Tobias Sargeant, Alicia Oshlack, Ian J. Majewski
2018 J jnl
Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database.
PLoS Comput. Biol.
Luke Zappia, Belinda Phipson, Alicia Oshlack
2016 J jnl
A cross-package Bioconductor workflow for analysing methylation array data.
F1000Research
Jovana Maksimovic, Belinda Phipson, Alicia Oshlack
2016 J jnl
missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform.
Bioinform.
Belinda Phipson, Jovana Maksimovic, Alicia Oshlack
2015 J jnl
Genotyping microsatellites in next-generation sequencing data.
BMC Bioinform.
Harriet Dashnow, Susan Tan, Debjani Das, Simon Easteal, Alicia Oshlack
2012 J jnl
Bpipe: a tool for running and managing bioinformatics pipelines.
Bioinform.
Simon P. Sadedin, Bernard J. Pope, Alicia Oshlack
2007 J jnl
A comparison of background correction methods for two-colour microarrays.
Bioinform.
Matthew E. Ritchie, Jeremy David Silver, Alicia Oshlack, Melissa Holmes, Dileepa S. Diyagama, Andrew J. Holloway, Gordon K. Smyth
2007 J jnl
Using DNA microarrays to study gene expression in closely related species.
Bioinform.
Alicia Oshlack, Adrien E. Chabot, Gordon K. Smyth, Yoav Gilad
2006 J jnl
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis.
BMC Bioinform.
Andrew J. Holloway, Alicia Oshlack, Dileepa S. Diyagama, David D. L. Bowtell, Gordon K. Smyth