Ali R. Khan

44 papers A 1B 4Journal 24Unranked 9
YearRankTypeTitle / Venue / Authors
2024 J jnl
MRI-degad: toward accurate conversion of gadolinium-enhanced T1w MRIs to non-contrast-enhanced scans using CNNs.
Int. J. Comput. Assist. Radiol. Surg.
Feyi Ogunsanya, Alaa Taha, Greydon Gilmore, Jason Kai, Tristan Kuehn, Arun Thurairajah, Mauricio C. Tenorio, Ali R. Khan, Jonathan C. Lau
2023 J jnl
Funcmasker-flex: An Automated BIDS-App for Brain Segmentation of Human Fetal Functional MRI data.
Neuroinformatics
Emily S. Nichols, Susana Correa, Peter Van Dyken, Jason Kai, Tristan Kuehn, Sandrine de Ribaupierre, Emma G. Duerden, Ali R. Khan
2022 J jnl
Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults.
Frontiers Neuroinformatics
Jason Kai, Ali R. Khan
2022 J jnl
Mapping the subcortical connectome using
NeuroImage
Jason Kai, Ali R. Khan, Roy A. M. Haast, Jonathan C. Lau
2021 J jnl
Corrections to "Image Guidance in Deep Brain Stimulation Surgery to Treat Parkinson's Disease: A Comprehensive Review".
IEEE Trans. Biomed. Eng.
Yiming Xiao, Jonathan C. Lau, Dimuthu Hemachandra, Greydon Gilmore, Ali R. Khan, Terry M. Peters
2021 J jnl
Effects of MP2RAGE B
NeuroImage
Roy A. M. Haast, Jonathan C. Lau, Dimo Ivanov, Ravi S. Menon, Kâmil Uludag, Ali R. Khan
2021 J jnl
Image Guidance in Deep Brain Stimulation Surgery to Treat Parkinson's Disease: A Comprehensive Review.
IEEE Trans. Biomed. Eng.
Yiming Xiao, Jonathan C. Lau, Dimuthu Hemachandra, Greydon Gilmore, Ali R. Khan, Terry M. Peters
2020 J jnl
Hippocampal subfields revealed through unfolding and unsupervised clustering of laminar and morphological features in 3D BigBrain.
NeuroImage
Jordan DeKraker, Jonathan C. Lau, Kayla M. Ferko, Ali R. Khan, Stefan Köhler
2020 J jnl
IJCARS: MICCAI 2019 special issue.
Int. J. Comput. Assist. Radiol. Surg.
Terry M. Peters, Caroline Essert, Ali R. Khan
2019 — ed.
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part I
MICCAI (1)
Dinggang Shen, Tianming Liu, Terry M. Peters, Lawrence H. Staib, Caroline Essert, Sean Zhou, Pew-Thian Yap, Ali R. Khan
2019 — ed.
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part II
MICCAI (2)
Dinggang Shen, Tianming Liu, Terry M. Peters, Lawrence H. Staib, Caroline Essert, Sean Zhou, Pew-Thian Yap, Ali R. Khan
2019 — ed.
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part III
MICCAI (3)
Dinggang Shen, Tianming Liu, Terry M. Peters, Lawrence H. Staib, Caroline Essert, Sean Zhou, Pew-Thian Yap, Ali R. Khan
2019 — ed.
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part IV
MICCAI (4)
Dinggang Shen, Tianming Liu, Terry M. Peters, Lawrence H. Staib, Caroline Essert, Sean Zhou, Pew-Thian Yap, Ali R. Khan
2019 — ed.
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part V
MICCAI (5)
Dinggang Shen, Tianming Liu, Terry M. Peters, Lawrence H. Staib, Caroline Essert, Sean Zhou, Pew-Thian Yap, Ali R. Khan
2019 — ed.
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part VI
MICCAI (6)
Dinggang Shen, Tianming Liu, Terry M. Peters, Lawrence H. Staib, Caroline Essert, Sean Zhou, Pew-Thian Yap, Ali R. Khan
2018 J jnl
Quantification of local geometric distortion in structural magnetic resonance images: Application to ultra-high fields.
NeuroImage
Jonathan C. Lau, Ali R. Khan, Tony Y. Zeng, Keith W. MacDougall, Andrew G. Parrent, Terry M. Peters
2018 J jnl
Unfolding the hippocampus: An intrinsic coordinate system for subfield segmentations and quantitative mapping.
NeuroImage
Jordan DeKraker, Kayla M. Ferko, Jonathan C. Lau, Stefan Köhler, Ali R. Khan
2016 — conf
Fast Deformable Image Registration with Non-smooth Dual Optimization.
CVPR Workshops
Martin Rajchl, John S. H. Baxter, Wu Qiu, Ali R. Khan, Aaron Fenster, Terry M. Peters, Daniel Rueckert, Jing Yuan
2016 B conf
Generation and evaluation of an ultra-high-field atlas with applications in DBS planning.
Image Processing
Brian T. Wang, Stefan Poirier, Ting Guo, Andrew G. Parrent, Terry M. Peters, Ali R. Khan
2016 J jnl
Hierarchical max-flow segmentation framework for multi-atlas segmentation with Kohonen self-organizing map based Gaussian mixture modeling.
Medical Image Anal.
Martin Rajchl, John S. H. Baxter, A. Jonathan McLeod, Jing Yuan, Wu Qiu, Terry M. Peters, Ali R. Khan
2016 J jnl
Individual feature maps: a patient-specific analysis tool with applications in temporal lobe epilepsy.
Int. J. Comput. Assist. Radiol. Surg.
Diego Cantor-Rivera, John S. H. Baxter, Sandrine de Ribaupierre, Jonathan C. Lau, Seyed M. Mirsattari, Maged Goubran, Jorge G. Burneo, David A. Steven, Terry M. Peters, Ali R. Khan
2016 — conf
Single slice US-MRI registration for neurosurgical MRI-guided US.
Image-Guided Procedures
Utsav Pardasani, John S. H. Baxter, Terry M. Peters, Ali R. Khan
2015 J jnl
Detection of temporal lobe epilepsy using support vector machines in multi-parametric quantitative MR imaging.
Comput. Medical Imaging Graph.
Diego Cantor-Rivera, Ali R. Khan, Maged Goubran, Seyed M. Mirsattari, Terry M. Peters
2015 J jnl
MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans.
Comput. Intell. Neurosci.
Adriënne M. Mendrik, Koen L. Vincken, Hugo J. Kuijf, Marcel Breeuwer, Willem H. Bouvy, Jeroen de Bresser, Amir Alansary, Marleen de Bruijne, Aaron Carass, Ayman El-Baz, Amod Jog, Ranveer Katyal, Ali R. Khan, Fedde van der Lijn, Qaiser Mahmood, Ryan Mukherjee, Annegreet van Opbroek, Sahil Paneri, Sérgio Pereira, Mikael Persson, Martin Rajchl, Duygu Sarikaya, Örjan Smedby, Carlos A. Silva, Henri A. Vrooman, Saurabh Vyas, Chunliang Wang, Liang Zhao, Geert Jan Biessels, Max A. Viergever
2015 J jnl
Training for Planning Tumour Resection: Augmented Reality and Human Factors.
IEEE Trans. Biomed. Eng.
Kamyar Abhari, John S. H. Baxter, Elvis C. S. Chen, Ali R. Khan, Terry M. Peters, Sandrine de Ribaupierre, Roy Eagleson
2015 J jnl
Visual Enhancement of MR Angiography Images to Facilitate Planning of Arteriovenous Malformation Interventions.
ACM Trans. Appl. Percept.
Kamyar Abhari, John S. H. Baxter, Ali R. Khan, Terry M. Peters, Sandrine de Ribaupierre, Roy Eagleson
2014 J jnl
RANCOR: Non-Linear Image Registration with Total Variation Regularization.
CoRR
Martin Rajchl, John S. H. Baxter, Wu Qiu, Ali R. Khan, Aaron Fenster, Terry M. Peters, Jing Yuan
2014 B conf
Smoothness parameter tuning for generalized hierarchical continuous max-flow segmentation.
Image Processing
John S. H. Baxter, Martin Rajchl, A. Jonathan McLeod, Ali R. Khan, Jing Yuan, Terry M. Peters
2013 J jnl
Image registration of ex-vivo MRI to sparsely sectioned histology of hippocampal and neocortical temporal lobe specimens.
NeuroImage
Maged Goubran, Cathie Crukley, Sandrine de Ribaupierre, Terence M. Peters, Ali R. Khan
2013 J jnl
Multistructure Large Deformation Diffeomorphic Brain Registration.
IEEE Trans. Biomed. Eng.
Ali R. Khan, Lei Wang, Mirza Faisal Beg
2013 — conf
The Role of Augmented Reality in Training the Planning of Brain Tumor Resection.
AE-CAI
Kamyar Abhari, John S. H. Baxter, Elvis C. S. Chen, Ali R. Khan, Chris Wedlake, Terry M. Peters, Roy Eagleson, Sandrine de Ribaupierre
2012 B conf
Robust registration of sparsely sectioned histology to ex-vivo MRI of temporal lobe resections.
Image Processing
Maged Goubran, Ali R. Khan, Cathie Crukley, Susan Buchanan, Brendan Santyr, Sandrine de Ribaupierre, Terry M. Peters
2012 — conf
Use of a Mixed-Reality System to Improve the Planning of Brain Tumour Resections: Preliminary Results.
AE-CAI
Kamyar Abhari, John S. H. Baxter, Elvis C. S. Chen, Ali R. Khan, Chris Wedlake, Terry M. Peters, Sandrine de Ribaupierre, Roy Eagleson
2011 — conf
Momentum-based morphometric analysis with application to Parkinson's disease.
Image-Guided Procedures
Jingyun Chen, Ali R. Khan, Martin J. McKeown, Mirza Faisal Beg
2011 J jnl
Optimal weights for local multi-atlas fusion using supervised learning and dynamic information (SuperDyn): Validation on hippocampus segmentation.
NeuroImage
Ali R. Khan, Nicolas Cherbuin, Wei Wen, Kaarin Anstey, Perminder S. Sachdev, Mirza Faisal Beg
2009 — conf
A Combined Surface And VOlumetric Registration (SAVOR) Framework to Study Cortical Biomarkers and Volumetric Imaging Data.
MICCAI (1)
Eli Gibson, Ali R. Khan, Mirza Faisal Beg
2009 J jnl
External landmark and head-shape-based functional data normalization.
Comput. Medical Imaging Graph.
Mirza Faisal Beg, Stephen Wong, Ali R. Khan, Teresa Cheung, Naznin Virji-Babul, Anthony T. Herdman
2009 B conf
Freesurfer-initialized large deformation diffeomorphic metric mapping with application to Parkinson's disease.
Image Processing
Jingyun Chen, Samantha J. Palmer, Ali R. Khan, Martin J. McKeown, Mirza Faisal Beg
2009 — conf
Robust Atlas-Based Brain Segmentation Using Multi-structure Confidence-Weighted Registration.
MICCAI (1)
Ali R. Khan, Moo K. Chung, Mirza Faisal Beg
2008 J jnl
FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using Large Deformation Diffeomorphic Metric Mapping.
NeuroImage
Ali R. Khan, Lei Wang, Mirza Faisal Beg
2008 — conf
Representation of time-varying shapes in the large deformation diffeomorphic framework.
ISBI
Ali R. Khan, Mirza Faisal Beg
2007 J jnl
Symmetric Data Attachment Terms for Large Deformation Image Registration.
IEEE Trans. Medical Imaging
Mirza Faisal Beg, Ali R. Khan
2006 — conf
Computing an average anatomical atlas using LDDMM and geodesic shooting.
ISBI
Mirza Faisal Beg, Ali R. Khan
2005 A conf
Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping.
MICCAI
Ali R. Khan, Elizabeth H. Aylward, Patrick Barta, Michael I. Miller, Mirza Faisal Beg