Alfonso Urso

71 papers B 5C 4Misc 4Journal 22Unranked 34
YearRankTypeTitle / Venue / Authors
2025 C conf
An Integrative Deep Learning Model for Drug-Target Interaction Prediction.
BIBE
Francesco Foderà, Salvatore Contino, Antonino Fiannaca, Alfonso Urso, Massimo La Rosa, Roberto Pirrone
2025 — conf
Identification of Key Genomic Variants for The Early Detection of Alzheimer's Disease: An Explainable Approach.
ICBRA
Anna Catarinolo, Massimo La Rosa, Laura La Paglia, Alfonso Urso, Antonino Fiannaca
2024 — conf
A Deep Learning Multi-omics Framework to Combine Microbiome and Metabolome Profiles for Disease Classification.
ICANN (8)
Andrea Licciardi, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso, Laura La Paglia
2024 B conf
A deep learning framework for disease classification integrating microbiome and metabolome: explaining multi-omics contribution.
KES
Andrea Licciardi, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso, Laura La Paglia
2024 B conf
Explainable artificial intelligence models for key-metabolites identification in overweight subjects.
KES
Isabella Mendolia, Antonino Fiannaca, Laura La Paglia, Alfonso Urso, Massimo La Rosa
2023 J jnl
GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data.
Briefings Bioinform.
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Salvatore Gaglio, Alfonso Urso
2022 C conf
A Gene Ontology-Driven Wide and Deep Learning Architecture for Cell-Type Classification from Single-Cell RNA-seq Data.
EANN
Gianmarco Coppola, Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Alfonso Urso, Salvatore Gaglio
2020 J jnl
BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics.
BMC Bioinform.
Alfonso Urso, Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Giosuè Lo Bosco, Riccardo Rizzo
2020 J jnl
miRTissue
BMC Bioinform.
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
2019 — ch.
Data Mining: Classification and Prediction.
Encyclopedia of Bioinformatics and Computational Biology (1)
Alfonso Urso, Antonino Fiannaca, Massimo La Rosa, Valentina Ravì, Riccardo Rizzo
2019 — ch.
Data Mining: Prediction Methods.
Encyclopedia of Bioinformatics and Computational Biology (1)
Alfonso Urso, Antonino Fiannaca, Massimo La Rosa, Valentina Ravì, Riccardo Rizzo
2019 J jnl
MiRNA therapeutics based on logic circuits of biological pathways.
BMC Bioinform.
Valeria Boscaino, Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
2019 J jnl
The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes.
BMC Bioinform.
Paolo Romano, Arnaud Céol, Andreas Dräger, Antonino Fiannaca, Rosalba Giugno, Massimo La Rosa, Luciano Milanesi, Ulrich Pfeffer, Riccardo Rizzo, Soo-Yong Shin, Junfeng Xia, Alfonso Urso
2018 J jnl
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources.
BMC Syst. Biol.
Antonio Messina, Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Alfonso Urso
2018 J jnl
Deep learning models for bacteria taxonomic classification of metagenomic data.
BMC Bioinform.
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Giosuè Lo Bosco, Giovanni Renda, Riccardo Rizzo, Salvatore Gaglio, Alfonso Urso
2018 — conf
Identification of Key miRNAs in Regulation of PPI Networks.
CIBB
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Giosuè Lo Bosco, Riccardo Rizzo, Alfonso Urso
2018 — conf
Variable Ranking Feature Selection for the Identification of Nucleosome Related Sequences.
ADBIS (Short Papers and Workshops)
Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
2017 Misc conf
BioGrakn: A Knowledge Graph-Based Semantic Database for Biomedical Sciences.
CISIS
Antonio Messina, Haikal Pribadi, Jo Stichbury, Michelangelo Bucci, Szymon Klarman, Alfonso Urso
2017 J jnl
Energy-Efficient Low-Power Circuits for Wireless Energy and Data Transfer in IoT Sensor Nodes.
CoRR
Gustavo C. Martins, Alfonso Urso, André Mansano, Yao Liu, Wouter A. Serdijn
2017 — conf
Gremlin Language for Querying the BiographDB Integrated Biological Database.
IWBBIO (1)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Antonio Messina, Riccardo Rizzo, Dario Stabile, Alfonso Urso
2017 J jnl
nRC: non-coding RNA Classifier based on structural features.
BioData Min.
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
2016 — conf
A Deep Learning Model for Epigenomic Studies.
SITIS
Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
2016 — conf
A Problem-Driven Approach for Building a Bioinformatics GraphDB.
CIBB
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Antonio Messina, Riccardo Rizzo, Alfonso Urso
2016 — conf
Classification Experiments of DNA Sequences by Using a Deep Neural Network and Chaos Game Representation.
CompSysTech
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
2016 — conf
EXPO: A Modern NoSQL-based ebXML Registry for Health Information Systems.
CompSysTech
Antonio Messina, Pietro Storniolo, Alfonso Urso
2016 — conf
Integrated DB for Bioinformatics: A Case Study on Analysis of Functional Effect of MiRNA SNPs in Cancer.
ITBAM
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Antonio Messina, Pietro Storniolo, Alfonso Urso
2016 — conf
Keep It Simple, Fast and Scalable: A Multi-model NoSQL DBMS as an (eb) XML-over-SOAP Service.
AINA Workshops
Antonio Messina, Pietro Storniolo, Alfonso Urso
2016 J jnl
MiRNATIP: a SOM-based miRNA-target interactions predictor.
BMC Bioinform.
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
2016 — conf
The Database-is-the-Service Pattern for Microservice Architectures.
ITBAM
Antonio Messina, Riccardo Rizzo, Pietro Storniolo, Mario Tripiciano, Alfonso Urso
2015 — conf
A Deep Learning Approach to DNA Sequence Classification.
CIBB
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
2015 J jnl
A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network.
Artif. Intell. Medicine
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
2015 J jnl
Analysis of miRNA expression profiles in breast cancer using biclustering.
BMC Bioinform.
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
2015 J jnl
Probabilistic topic modeling for the analysis and classification of genomic sequences.
BMC Bioinform.
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
2014 J jnl
An expert system hybrid architecture to support experiment management.
Expert Syst. Appl.
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
2014 — conf
Knowledge organization for modelling workflows in Taverna environment.
MED
Antonino Fiannaca, Massimo La Rosa, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
2014 J jnl
The BioDICE Taverna plugin for clustering and visualization of biological data: a workflow for molecular compounds exploration.
J. Cheminformatics
Antonino Fiannaca, Massimo La Rosa, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
2014 — conf
The General Regression Neural Network to Classify Barcode and mini-barcode DNA.
CIBB
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
2013 J jnl
A knowledge-based decision support system in bioinformatics: an application to protein complex extraction.
BMC Bioinform.
Antonino Fiannaca, Massimo La Rosa, Alfonso Urso, Riccardo Rizzo, Salvatore Gaglio
2013 J jnl
Alignment-free analysis of barcode sequences by means of compression-based methods.
BMC Bioinform.
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
2013 — conf
Analysis of DNA Barcode Sequences Using Neural Gas and Spectral Representation.
EANN (2)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
2013 — conf
Genomic Sequence Classification Using Probabilistic Topic Modeling.
CIBB
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
2013 J jnl
Simulated annealing technique for fast learning of SOM networks.
Neural Comput. Appl.
Antonino Fiannaca, Giuseppe Di Fatta, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
2012 — conf
A Study of Compression-Based Methods for the Analysis of Barcode Sequences.
CIBB
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
2012 Misc conf
An Intelligent System for Building Bioinformatics Workflows.
CISIS
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
2011 J jnl
Soft Topographic Maps for Clustering and Classifying Bacteria Using Housekeeping Genes.
Adv. Artif. Neural Syst.
Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
2010 — conf
A Knowledge Based Decision Support System for Bioinformatics and System Biology.
CIBB
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Daniele Peri, Riccardo Rizzo, Alfonso Urso
2010 — conf
High Performance Networks.
Euro-Par (2)
José Flich, Alfonso Urso, Ulrich Brüning, Giuseppe Di Fatta
2009 — conf
A Proposed Knowledge Based Approach for Solving Proteomics Issues.
CIBB
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Daniele Peri, Riccardo Rizzo, Alfonso Urso
2009 — conf
Identifying Clusters Using Growing Neural Gas: First Results.
ICANN (1)
Riccardo Rizzo, Alfonso Urso
2009 J jnl
Normalised compression distance and evolutionary distance of genomic sequences: comparison of clustering results.
Int. J. Knowl. Eng. Soft Data Paradigms
Massimo La Rosa, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
2008 — conf
A New Linear Initialization in SOM for Biomolecular Data.
CIBB
Antonino Fiannaca, Giuseppe Di Fatta, Alfonso Urso, Riccardo Rizzo, Salvatore Gaglio
2008 — conf
A New SOM Initialization Algorithm for Nonvectorial Data.
KES (1)
Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
2008 — conf
Clustering Bacteria Species Using Neural Gas: Preliminary Study.
CIBB
Claudio Mirabello, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
2008 — conf
Clustering Quality and Topology Preservation in Fast Learning SOMs.
ICANN (1)
Antonino Fiannaca, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
2008 — conf
Comparison of Genomic Sequences Clustering Using Normalized Compression Distance and Evolutionary Distance.
KES (3)
Massimo La Rosa, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
2007 C conf
DNK-WSD: A Distributed Approach for Knowledge Discovery in Peer to Peer Networks.
PDP
Giovanni Aiello, Marco Alessi, Massimo Cossentino, Pietro Storniolo, Alfonso Urso
2007 B conf
Fast Training of Self Organizing Maps for the Visual Exploration of Molecular Compounds.
IJCNN
Antonino Fiannaca, Giuseppe Di Fatta, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
2007 — conf
Improved SOM Learning Using Simulated Annealing.
ICANN (1)
Antonino Fiannaca, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
2007 B conf
Soft Topographic Map for Clustering and Classification of Bacteria.
IDA
Massimo La Rosa, Giuseppe Di Fatta, Salvatore Gaglio, Giovanni M. Giammanco, Riccardo Rizzo, Alfonso Urso
2006 J jnl
A Logical Architecture for Active Network Management.
J. Netw. Syst. Manag.
Salvatore Gaglio, Luca Gatani, Giuseppe Lo Re, Alfonso Urso
2006 — conf
Context-Aware Visual Exploration of Molecular Datab.
ICDM Workshops
Giuseppe Di Fatta, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso, Michael R. Berthold, Salvatore Gaglio
2006 — conf
RTDWD: Real-Time Distributed Wideband-Delphi for User Stories Estimation.
RISE
Giovanni Aiello, Marco Alessi, Massimo Cossentino, Alfonso Urso, Giuseppe Vella
2005 C conf
An efficient retransmission strategy for data gathering in wireless sensor networks.
ETFA
Marco Ortolani, Luca Gatani, Giuseppe Lo Re, Alfonso Urso, Salvatore Gaglio
2005 — conf
Rule Based Reasoning for Network Management.
CAMP
Alessandra De Paola, S. Fiduccia, Salvatore Gaglio, Luca Gatani, Giuseppe Lo Re, A. Pizzitola, Marco Ortolani, Pietro Storniolo, Alfonso Urso
2004 B conf
A Dynamic Reasoning Architecture for Computer Network Management.
ICTAI
Salvatore Gaglio, Luca Gatani, Giuseppe Lo Presti, Giuseppe Lo Re, Alfonso Urso
2004 Misc conf
A Grid Enabled Parallel Hybrid Genetic Algorithm for SPN.
International Conference on Computational Science
Giuseppe Lo Presti, Giuseppe Lo Re, Pietro Storniolo, Alfonso Urso
2004 — conf
Exploiting deductive processes for automated network management.
ICON
Salvatore Gaglio, Luca Gatani, Giuseppe Lo Re, Alfonso Urso
2004 — conf
The Random Neural Network Model for the On-Line Multicast Problem.
WIRN
Giovanni Aiello, Salvatore Gaglio, Giuseppe Lo Re, Pietro Storniolo, Alfonso Urso
2003 J jnl
A genetic algorithm for the design of a fuzzy controller for active queue management.
IEEE Trans. Syst. Man Cybern. Part C
Giuseppe Di Fatta, Frank Hoffmann, Giuseppe Lo Re, Alfonso Urso
2003 — conf
Parallel Genetic Algorithms for the Tuning of a Fuzzy AQM Controller.
ICCSA (1)
Giuseppe Di Fatta, Giuseppe Lo Re, Alfonso Urso
2002 Misc conf
A Fuzzy Approach for the Network Congestion Problem.
International Conference on Computational Science (1)
Giuseppe Di Fatta, Giuseppe Lo Re, Alfonso Urso