Alexandre Rossi Paschoal

17 papers C 2Journal 9Unranked 5
YearRankTypeTitle / Venue / Authors
2025 J jnl
DeepSEA: an alignment-free explainable approach to annotate antimicrobial resistance proteins.
BMC Bioinform.
Tiago Cabral Borelli, Alexandre Rossi Paschoal, Ricardo Roberto da Silva
2024 C conf
Classification of LTR Retrotransposons via Interaction Prediction.
CIBCB
Silvana C. S. Cardoso, Douglas Silva Domingues, Alexandre Rossi Paschoal, Carlos N. Fischer, Ricardo Cerri
2023 — conf
A Simple and Interpretable Deep Learning Model for Diagnosing Pneumonia from Chest X-Ray Images.
ICCABS
Lucas Otávio L. Silva, Karine Marques Hara, Pedro Henrique Mendes de Paula, Alexandre Rossi Paschoal, Fabrício Martins Lopes
2023 J jnl
Inpactor2: a software based on deep learning to identify and classify LTR-retrotransposons in plant genomes.
Briefings Bioinform.
Simon Orozco-Arias, Luis Humberto López-Murillo, Mariana S. Candamil-Cortes, Maradey Arias, Paula A. Jaimes, Alexandre Rossi Paschoal, Reinel Tabares-Soto, Gustavo A. Isaza, Romain Guyot
2023 — conf
Make No Mistake! Why Do Tools Make Incorrect Long Non-coding RNA Classification?
BSB
Alisson Gaspar Chiquitto, Lucas Otávio L. Silva, Liliane Santana Oliveira, Douglas Silva Domingues, Alexandre Rossi Paschoal
2022 — conf
Impact of sequencing technologies on long non-coding RNA computational identification.
BIBM
Alisson Gaspar Chiquitto, Lucas Otávio L. Silva, Liliane S. Oliveira, Douglas Silva Domingues, Alexandre Rossi Paschoal
2021 J jnl
Feature extraction approaches for biological sequences: a comparative study of mathematical features.
Briefings Bioinform.
Robson Bonidia, Lucas Dias H. Sampaio, Douglas Silva Domingues, Alexandre Rossi Paschoal, Fabrício Martins Lopes, André C. P. L. F. de Carvalho, Danilo Sipoli Sanches
2021 J jnl
TERL: classification of transposable elements by convolutional neural networks.
Briefings Bioinform.
Murilo Horacio Pereira da Cruz, Douglas Silva Domingues, Priscila Tiemi Maeda Saito, Alexandre Rossi Paschoal, Pedro Henrique Bugatti
2020 J jnl
A Novel Decomposing Model With Evolutionary Algorithms for Feature Selection in Long Non-Coding RNAs.
IEEE Access
Robson Parmezan Bonidia, Jaqueline Sayuri Machida, Tatianne da Costa Negri, Wonder Alexandre Luz Alves, André Y. Kashiwabara, Douglas Silva Domingues, André C. P. L. F. de Carvalho, Alexandre Rossi Paschoal, Danilo Sipoli Sanches
2020 C conf
Comparison tools for lncRNA identification: analysis among plants and humans.
CIBCB
Tatianne da Costa Negri, Alexandre Rossi Paschoal, Wonder Alexandre Luz Alves
2019 — conf
Classification of Transposable Elements by Convolutional Neural Networks.
ICAISC (2)
Murilo Horacio Pereira da Cruz, Priscila T. M. Saito, Alexandre Rossi Paschoal, Pedro Henrique Bugatti
2019 J jnl
Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants.
Briefings Bioinform.
Tatianne da Costa Negri, Wonder Alexandre Luz Alves, Pedro Henrique Bugatti, Priscila Tiemi Maeda Saito, Douglas Silva Domingues, Alexandre Rossi Paschoal
2019 — conf
Selecting the Most Relevant Features for the Identification of Long Non-Coding RNAs in Plants.
BRACIS
Robson Parmezan Bonidia, André Carlos Ponce de Leon Ferreira de Carvalho, Alexandre Rossi Paschoal, Danilo Sipoli Sanches
2019 J jnl
mirtronDB: a mirtron knowledge base.
Bioinform.
Bruno Henrique Ribeiro Da Fonseca, Douglas Silva Domingues, Alexandre Rossi Paschoal
2018 J jnl
PlaNC-TE: a comprehensive knowledgebase of non-coding RNAs and transposable elements in plants.
Database J. Biol. Databases Curation
Daniel Longhi Fernandes Pedro, Alan Péricles Rodrigues Lorenzetti, Douglas Silva Domingues, Alexandre Rossi Paschoal
2018 J jnl
ceRNAs in plants: computational approaches and associated challenges for target mimic research.
Briefings Bioinform.
Alexandre Rossi Paschoal, Irma Lozada-Chávez, Douglas Silva Domingues, Peter F. Stadler
2012 — —
Bioinformática aplicada em RNomics: estratégias computacionais para caracterização de RNAs não-codificadores.
Alexandre Rossi Paschoal