Alexander T. Dilthey

12 papers A 1B 2C 1Journal 8
YearRankTypeTitle / Venue / Authors
2025 B conf
Integer Programming Framework for Pangenome-Based Genome Inference.
RECOMB
Ghanshyam Chandra, Md. Helal Hossen, Stephan Scholz, Alexander T. Dilthey, Daniel Gibney, Chirag Jain
2024 J jnl
SWGTS - a platform for stream-based host DNA depletion.
Bioinform.
Philipp Spohr, Max Ried, Laura C. Kühle, Alexander T. Dilthey
2019 A conf
Accelerating Sequence Alignment to Graphs.
IPDPS
Chirag Jain, Sanchit Misra, Haowen Zhang, Alexander T. Dilthey, Srinivas Aluru
2019 J jnl
HLA*LA - HLA typing from linearly projected graph alignments.
Bioinform.
Alexander T. Dilthey, Alexander J. Mentzer, Raphael Carapito, Clare Cutland, Nezih Cereb, Shabir A Madhi, Arang Rhie, Sergey Koren, Seiamak Bahram, Gil McVean, Adam M. Phillippy
2019 C conf
Validating Paired-End Read Alignments in Sequence Graphs.
WABI
Chirag Jain, Haowen Zhang, Alexander T. Dilthey, Srinivas Aluru
2018 J jnl
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases.
J. Comput. Biol.
Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy
2018 J jnl
A fast adaptive algorithm for computing whole-genome homology maps.
Bioinform.
Chirag Jain, Sergey Koren, Alexander T. Dilthey, Adam M. Phillippy, Srinivas Aluru
2018 J jnl
NovoGraph: Genome graph construction from multiple long-read
F1000Research
Evan Biederstedt, Jeffrey C. Oliver, Nancy F. Hansen, Aarti Jajoo, Nathan A. Dunn, Andrew Olson, Ben Busby, Alexander T. Dilthey
2017 B conf
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases.
RECOMB
Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy
2016 J jnl
High-Accuracy HLA Type Inference from Whole-Genome Sequencing Data Using Population Reference Graphs.
PLoS Comput. Biol.
Alexander T. Dilthey, Pierre-Antoine Gourraud, Alexander J. Mentzer, Nezih Cereb, Zamin Iqbal, Gil McVean
2013 J jnl
Multi-Population Classical HLA Type Imputation.
PLoS Comput. Biol.
Alexander T. Dilthey, Stephen Leslie, Loukas Moutsianas, Judong Shen, Charles Cox, Matthew R. Nelson, Gil McVean
2011 J jnl
HLA*IMP - an integrated framework for imputing classical HLA alleles from SNP genotypes.
Bioinform.
Alexander T. Dilthey, Loukas Moutsianas, Stephen Leslie, Gil McVean