Alexander Sczyrba

24 papers B 1C 1Journal 18Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
Hybrid Cloud Architectures for Research Computing: Applications and Use Cases.
CoRR
Xaver Stiensmeier, Alexander Kanitz, Jan Krüger, Santiago Insua, Adrián Rosinec, Viktória Spisaková, Lukás Hejtmánek, David Yuan, Gavin Farrell, Jonathan Tedds, Juha Törnroos, Harald Wagener, Alexander Sczyrba, Nils Hoffmann, Matej Antol
2025 J jnl
subMG automates data submission for metagenomics studies.
BioData Min.
Tom Tubbesing, Andreas Schlüter, Alexander Sczyrba
2023 — conf
Base4NFDI - Basic Services for NFDI Creating NFDI-Wide Basic Services in a World of Specific Domains.
CoRDI
Sonja Schimmler, Reinhard Altenhöner, Lars Bernard, Juliane Fluck, Axel Klinger, Sören Lorenz, Brigitte Mathiak, Bernhard Miller, Raphael Ritz, Thomas Schörner-Sadenius, Alexander Sczyrba, Regine Stein
2023 — conf
Embedding the de.NBI Cloud in the National Research Data Infrastructure Activities.
CoRDI
Nils Hoffmann, Irena Maus, Sebastian Beier, Peter Belmann, Jan Krüger, Andreas Tauch, Alexander Goesmann, Roland Eils, Peer Bork, Oliver Kohlbacher, Ursula Kummer, Rolf Backofen, Ivo Buchhalter, Alexander Sczyrba
2020 J jnl
ConCysFind: a pipeline tool to predict conserved amino acids of protein sequences across the plant kingdom.
BMC Bioinform.
Marten Moore, Corinna Wesemann, Nikolaj Gossmann, Arne Sahm, Jan Krüger, Alexander Sczyrba, Karl-Josef Dietz
2019 J jnl
de.NBI Cloud federation through ELIXIR AAI.
F1000Research
Peter Belmann, Björn Fischer, Jan Krüger, Michal Procházka, Helena Rasche, Manuel Prinz, Maximilian Hanussek, Martin Lang, Felix Bartusch, Benjamin Gläßle, Jens Krüger, Alfred Pühler, Alexander Sczyrba
2018 J jnl
Analyzing large scale genomic data on the cloud with Sparkhit.
Bioinform.
Liren Huang, Jan Krüger, Alexander Sczyrba
2018 J jnl
Common ELIXIR Service for Researcher Authentication and Authorisation.
F1000Research
Mikael Linden, Michal Procházka, Ilkka Lappalainen, Dominik Bucik, Pavel Vyskocil, Martin Kuba, Sami Silén, Peter Belmann, Alexander Sczyrba, Steven J. Newhouse, Ludek Matyska, Tommi H. Nyrönen
2016 J jnl
MeCorS: Metagenome-enabled error correction of single cell sequencing reads.
Bioinform.
Andreas Bremges, Esther Singer, Tanja Woyke, Alexander Sczyrba
2016 J jnl
acdc - Automated Contamination Detection and Confidence estimation for single-cell genome data.
BMC Bioinform.
Markus Lux, Jan Krüger, Christian Rinke, Irena Maus, Andreas Schlüter, Tanja Woyke, Alexander Sczyrba, Barbara Hammer
2015 B conf
Automatic discovery of metagenomic structure.
IJCNN
Markus Lux, Alexander Sczyrba, Barbara Hammer
2013 C conf
Nonlinear Dimensionality Reduction for Cluster Identification in Metagenomic Samples.
IV
Andrej Gisbrecht, Barbara Hammer, Bassam Mokbel, Alexander Sczyrba
2012 J jnl
Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package.
BMC Bioinform.
Mohamed El-Kalioby, Mohamed Abouelhoda, Jan Krüger, Robert Giegerich, Alexander Sczyrba, Dennis P. Wall, Peter J. Tonellato
2008 J jnl
GeneFisher-P: variations of GeneFisher as processes in Bio-jETI.
BMC Bioinform.
Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen, Alexander Sczyrba, Sven Hartmeier, Robert Giegerich
2008 J jnl
Two interactive Bioinformatics courses at the Bielefeld University Bioinformatics Server.
Briefings Bioinform.
Alexander Sczyrba, Susanne Konermann, Robert Giegerich
2006 — —
Genome analysis based on EST collections: a clustering pipeline and a database on Xenopus laevis
Alexander Sczyrba
2006 J jnl
IsoSVM - Distinguishing isoforms and paralogs on the protein level.
BMC Bioinform.
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Alexander Sczyrba, Georg Fuellen
2004 J jnl
AGenDA: gene prediction by cross-species sequence comparison.
Nucleic Acids Res.
Leila Taher, Oliver Rinner, Saurabh Garg, Alexander Sczyrba, Burkhard Morgenstern
2004 — conf
Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics.
German Conference on Bioinformatics
Michael Beckstette, Alexander Sczyrba, Paul M. Selzer
2004 J jnl
Genlight: Interactive high-throughput sequence analysis and comparative genomics.
J. Integr. Bioinform.
Michael Beckstette, Jens T. Mailänder, Richard J. Marhöfer, Alexander Sczyrba, Enno Ohlebusch, Robert Giegerich, Paul M. Selzer
2004 J jnl
e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences.
Nucleic Acids Res.
Jan Krüger, Alexander Sczyrba, Stefan Kurtz, Robert Giegerich
2003 J jnl
AGenDA: homology-based gene prediction.
Bioinform.
Leila Taher, Oliver Rinner, Saurabh Garg, Alexander Sczyrba, Michael Brudno, Serafim Batzoglou, Burkhard Morgenstern
2003 J jnl
AltAVisT: Comparing alternative multiple sequence alignments.
Bioinform.
Burkhard Morgenstern, Sachin Goel, Alexander Sczyrba, Andreas W. M. Dress
2003 J jnl
RNA-related tools on the Bielefeld Bioinformatics Server.
Nucleic Acids Res.
Alexander Sczyrba, Jan Krüger, Henning Mersch, Stefan Kurtz, Robert Giegerich