Alex Gavryushkin

12 papers Journal 12
YearRankTypeTitle / Venue / Authors
2025 J jnl
Accurate Bayesian phylogenetic point estimation using a tree distribution parameterized by clade probabilities.
PLoS Comput. Biol.
Lars Berling, Jonathan Klawitter, Remco R. Bouckaert, Dong Xie, Alex Gavryushkin, Alexei J. Drummond
2025 J jnl
Filtering for Highly Variable Genes and High-Quality Spots Improves Phylogenetic Analysis of Cancer Spatial Transcriptomics Visium Data.
J. Comput. Biol.
Alexandra Gavryushkina, Holly R. Pinkney, Sarah D. Diermeier, Alex Gavryushkin
2024 J jnl
An Automated Convergence Diagnostic for Phylogenetic MCMC Analyses.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lars Berling, Remco R. Bouckaert, Alex Gavryushkin
2024 J jnl
Estimating the mean in the space of ranked phylogenetic trees.
Bioinform.
Lars Berling, Lena Collienne, Alex Gavryushkin
2023 J jnl
Testing for Phylogenetic Signal in Single-Cell RNA-Seq Data.
J. Comput. Biol.
Jirí C. Moravec, Robert Lanfear, David L. Spector, Sarah D. Diermeier, Alex Gavryushkin
2022 J jnl
A fast lasso-based method for inferring higher-order interactions.
PLoS Comput. Biol.
Kieran Elmes, Astra Heywood, Zhiyi Huang, Alex Gavryushkin
2021 J jnl
The Geometry of the space of Discrete Coalescent Trees.
CoRR
Lena Collienne, Kieran Elmes, Mareike Fischer, David Bryant, Alex Gavryushkin
2020 J jnl
Computing nearest neighbour interchange distances between ranked phylogenetic trees.
CoRR
Lena Collienne, Alex Gavryushkin
2017 J jnl
Tiling algebra for constraint-based layout editing.
J. Log. Algebraic Methods Program.
Clemens Zeidler, Gerald Weber, Alex Gavryushkin, Christof Lutteroth
2016 J jnl
Dynamic Algorithms for Multimachine Interval Scheduling Through Analysis of Idle Intervals.
Algorithmica
Alex Gavryushkin, Bakhadyr Khoussainov, Mikhail Kokho, Jiamou Liu
2016 J jnl
Reducibilities among equivalence relations induced by recursively enumerable structures.
Theor. Comput. Sci.
Alex Gavryushkin, Bakhadyr Khoussainov, Frank Stephan
2014 J jnl
Dynamic Algorithms for Interval Scheduling on a Single Machine.
CoRR
Alex Gavryushkin, Bakhadyr Khoussainov, Mikhail Kokho, Jiamou Liu