Alejandro Chacón

12 papers A 1C 2Misc 2Journal 6
YearRankTypeTitle / Venue / Authors
2026 J jnl
gpuPairHMM: High-Speed Pair-HMM Forward Algorithm for DNA Variant Calling on GPUs.
IEEE Trans. Comput. Biol. Bioinform.
Bertil Schmidt, Felix Kallenborn, Alexander Wichmann, Alejandro Chacón, Christian Hundt
2024 J jnl
CUDASW++4.0: ultra-fast GPU-based Smith-Waterman protein sequence database search.
BMC Bioinform.
Bertil Schmidt, Felix Kallenborn, Alejandro Chacón, Christian Hundt
2024 J jnl
gpuPairHMM: High-speed Pair-HMM Forward Algorithm for DNA Variant Calling on GPUs.
CoRR
Bertil Schmidt, Felix Kallenborn, Alexander Wichmann, Alejandro Chacón, Christian Hundt
2023 J jnl
Towards a cognitive assistant supporting human operators in the Artificial Intelligence of Things.
Internet Things
Cecilio Angulo, Alejandro Chacón, Pere Ponsa
2021 — —
Read mapping on heterogeneous systems: scalability strategies for bioinformatic primitives.
Alejandro Chacón
2018 C conf
Simulating SVE-Optimised Genomics Workloads on Gem5.
CLUSTER
Javier Setoain, Alejandro Chacón, Filippo Spiga
2016 Misc conf
Embedded Real-time Stereo Estimation via Semi-Global Matching on the GPU.
ICCS
Daniel Hernández Juárez, Alejandro Chacón, Antonio Espinosa, David Vázquez, Juan Carlos Moure, Antonio M. López
2016 J jnl
Embedded real-time stereo estimation via Semi-Global Matching on the GPU.
CoRR
Daniel Hernández Juárez, Alejandro Chacón, Antonio Espinosa, David Vázquez, Juan Carlos Moure, Antonio Manuel López Peña
2015 J jnl
Boosting the FM-Index on the GPU: Effective Techniques to Mitigate Random Memory Access.
IEEE ACM Trans. Comput. Biol. Bioinform.
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
2014 C conf
FM-Index on GPU: A Cooperative Scheme to Reduce Memory Footprint.
ISPA
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
2014 A conf
Thread-cooperative, bit-parallel computation of levenshtein distance on GPU.
ICS
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
2013 Misc conf
n-step FM-Index for Faster Pattern Matching.
ICCS
Alejandro Chacón, Juan Carlos Moure, Antonio Espinosa, Porfidio Hernández