Alberto J. M. Martin

13 papers Journal 12Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
ENcyclopedia of TRAnscription Factors in Bacteria and Archaea genomes (ENTRAF) version 2.0.
Database J. Biol. Databases Curation
Silvia Tenorio-Salgado, Cinthia Rodríguez Maya, Edgardo Galán-Vásquez, André Borges Farias, Dulce Álvarez-López, Jose Luis Villalpando-Aguilar, Alberto J. M. Martin, Leonardo Ledesma-Dominguez, Ernesto Pérez-Rueda
2025 J jnl
Understanding relationships between epigenetic marks and their application to robust assignment of chromatin states.
Briefings Bioinform.
Leandro Murgas, Gianluca Pollastri, Erick Riquelme, Mauricio Sáez, Alberto J. M. Martin
2021 J jnl
Atlas: automatic modeling of regulation of bacterial gene expression and metabolism using rule-based languages.
Bioinform.
Rodrigo Santibañez, Daniel Garrido, Alberto J. M. Martin
2012 J jnl
ESpritz: accurate and fast prediction of protein disorder.
Bioinform.
Ian Walsh, Alberto J. M. Martin, Tomás Di Domenico, Silvio C. E. Tosatto
2012 J jnl
MobiDB: a comprehensive database of intrinsic protein disorder annotations.
Bioinform.
Tomás Di Domenico, Ian Walsh, Alberto J. M. Martin, Silvio C. E. Tosatto
2011 J jnl
CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs.
Nucleic Acids Res.
Ian Walsh, Alberto J. M. Martin, Tomás Di Domenico, Alessandro Vullo, Gianluca Pollastri, Silvio C. E. Tosatto
2011 J jnl
RING: networking interacting residues, evolutionary information and energetics in protein structures.
Bioinform.
Alberto J. M. Martin, Michele Vidotto, Filippo Boscariol, Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto
2010 J jnl
MOBI: a web server to define and visualize structural mobility in NMR protein ensembles.
Bioinform.
Alberto J. M. Martin, Ian Walsh, Silvio C. E. Tosatto
2009 J jnl
Ab initio and homology based prediction of protein domains by recursive neural networks.
BMC Bioinform.
Ian Walsh, Alberto J. M. Martin, Catherine Mooney, Enrico Rubagotti, Alessandro Vullo, Gianluca Pollastri
2009 — conf
Neural Network Pairwise Interaction Fields for Protein Model Quality Assessment.
LION
Alberto J. M. Martin, Alessandro Vullo, Gianluca Pollastri
2008 J jnl
Long-Range Information and Physicality Constraints Improve predicted protein Contact Maps.
J. Bioinform. Comput. Biol.
Alberto J. M. Martin, Davide Baù, Alessandro Vullo, Ian Walsh, Gianluca Pollastri
2007 J jnl
Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information.
BMC Bioinform.
Gianluca Pollastri, Alberto J. M. Martin, Catherine Mooney, Alessandro Vullo
2006 J jnl
Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins.
BMC Bioinform.
Davide Baù, Alberto J. M. Martin, Catherine Mooney, Alessandro Vullo, Ian Walsh, Gianluca Pollastri