Alan R. Aronson

77 papers A* 1C 1Misc 26Journal 25Unranked 24

Year	Rank	Type	Title / Venue / Authors
2019	J	`jnl`	Spell checker for consumer language (CSpell). J. Am. Medical Informatics Assoc. Chris J. Lu, Alan R. Aronson, Sonya E. Shooshan, Dina Demner-Fushman
2018	Misc	`conf`	Finding medication doses in the literature. AMIA Dina Demner-Fushman, James G. Mork, Willie J. Rogers, Sonya E. Shooshan, Laritza M. Rodriguez, Alan R. Aronson
2018	Misc	`conf`	Increasing UMLS Coverage and Reducing Ambiguity via Automated Creation of Synonymous Terms. AMIA François-Michel Lang, James G. Mork, Dina Demner-Fushman, Alan R. Aronson
2017	J	`jnl`	12 years on - Is the NLM medical text indexer still useful and relevant? J. Biomed. Semant. James G. Mork, Alan R. Aronson, Dina Demner-Fushman
2017	J	`jnl`	MetaMap Lite: an evaluation of a new Java implementation of MetaMap. J. Am. Medical Informatics Assoc. Dina Demner-Fushman, Willie J. Rogers, Alan R. Aronson
2015	J	`jnl`	Feature engineering for MEDLINE citation categorization with MeSH. BMC Bioinform. Antonio Jimeno-Yepes, Laura Plaza, Jorge Carrillo de Albornoz, James G. Mork, Alan R. Aronson
2014	—	`conf`	A repository of semantic types in the MIMIC II database clinical notes. BioNLP@ACL Richard Osborne, Alan R. Aronson, Kevin Bretonnel Cohen
2014	J	`jnl`	Applying MetaMap to Medline for identifying novel associations in a large clinical dataset: a feasibility analysis. J. Am. Medical Informatics Assoc. David A. Hanauer, Mohammed Saeed, Kai Zheng, Qiaozhu Mei, Kerby Shedden, Alan R. Aronson, Naren Ramakrishnan
2014	—	`conf`	Recent Enhancements to the NLM Medical Text Indexer. CLEF (Working Notes) James G. Mork, Dina Demner-Fushman, Susan Schmidt, Alan R. Aronson
2014	Misc	`conf`	Vocabulary Density Method for Customized Indexing of MEDLINE Journals. AMIA James G. Mork, Dina Demner-Fushman, Susan Schmidt, Alan R. Aronson
2013	Misc	`conf`	Comparison and combination of several MeSH indexing approaches. AMIA Antonio Jimeno-Yepes, James G. Mork, Dina Demner-Fushman, Alan R. Aronson
2013	J	`jnl`	GeneRIF indexing: sentence selection based on machine learning. BMC Bioinform. Antonio Jimeno-Yepes, J. Caitlin Sticco, James G. Mork, Alan R. Aronson
2013	—	`conf`	Identifying Publication Types Using Machine Learning. BioASQ@CLEF Antonio Jimeno-Yepes, James G. Mork, Alan R. Aronson
2013	J	`jnl`	MeSH indexing based on automatically generated summaries. BMC Bioinform. Antonio José Jimeno-Yepes, Laura Plaza, James G. Mork, Alan R. Aronson, Alberto Díaz
2013	Misc	`conf`	Mining MEDLINE for problems associated with vitamin D. AMIA Dina Demner-Fushman, James G. Mork, Alan R. Aronson
2013	—	`conf`	The NLM Medical Text Indexer System for Indexing Biomedical Literature. BioASQ@CLEF James G. Mork, Antonio Jimeno-Yepes, Alan R. Aronson
2013	—	`conf`	Using the Argumentative Structure of Scientific Literature to Improve Information Access. BioNLP@ACL Antonio Jimeno-Yepes, James G. Mork, Alan R. Aronson
2012	J	`jnl`	A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection Based on Meta-Learning. J. Comput. Sci. Eng. Antonio Jimeno-Yepes, James G. Mork, Dina Demner-Fushman, Alan R. Aronson
2012	—	`conf`	Integration of UMLS and MEDLINE in Unsupervised Word Sense Disambiguation. AAAI Fall Symposium: Information Retrieval and Knowledge Discovery in Biomedical Text Antonio Jimeno-Yepes, Alan R. Aronson
2012	—	`conf`	Knowledge-based and knowledge-lean methods combined in unsupervised word sense disambiguation. IHI Antonio Jimeno-Yepes, Alan R. Aronson
2012	—	`conf`	MEDLINE MeSH indexing: lessons learned from machine learning and future directions. IHI Antonio Jimeno-Yepes, James G. Mork, Bartlomiej Wilkowski, Dina Demner-Fushman, Alan R. Aronson
2012	—	`conf`	NLM at TREC 2012 Medical Records Track. TREC Dina Demner-Fushman, Swapna Abhyankar, Antonio Jimeno-Yepes, Russell F. Loane, François-Michel Lang, James G. Mork, Nicolas Ide, Alan R. Aronson
2011	—	`conf`	A Knowledge-Based Approach to Medical Records Retrieval. TREC Dina Demner-Fushman, Swapna Abhyankar, Antonio Jimeno-Yepes, Russell F. Loane, Bastien Rance, François-Michel Lang, Nicholas C. Ide, Emilia Apostolova, Alan R. Aronson
2011	J	`jnl`	Collocation analysis for UMLS knowledge-based word sense disambiguation. BMC Bioinform. Antonio Jimeno-Yepes, Bridget T. McInnes, Alan R. Aronson
2011	J	`jnl`	Exploiting MeSH indexing in MEDLINE to generate a data set for word sense disambiguation. BMC Bioinform. Antonio José Jimeno-Yepes, Bridget T. McInnes, Alan R. Aronson
2011	—	`conf`	Self-training and co-training in biomedical word sense disambiguation. BioNLP@ACL Antonio Jimeno-Yepes, Alan R. Aronson
2011	J	`jnl`	Studying the correlation between different word sense disambiguation methods and summarization effectiveness in biomedical texts. BMC Bioinform. Laura Plaza, Antonio José Jimeno-Yepes, Alberto Díaz, Alan R. Aronson
2010	J	`jnl`	An overview of MetaMap: historical perspective and recent advances. J. Am. Medical Informatics Assoc. Alan R. Aronson, François-Michel Lang
2010	J	`jnl`	Extracting Rx information from clinical narrative. J. Am. Medical Informatics Assoc. James G. Mork, Olivier Bodenreider, Dina Demner-Fushman, Rezarta Islamaj Dogan, François-Michel Lang, Zhiyong Lu, Aurélie Névéol, Lee B. Peters, Sonya E. Shooshan, Alan R. Aronson
2010	J	`jnl`	Improving an automatically extracted corpus for UMLS Metathesaurus word sense disambiguation. Proces. del Leng. Natural Antonio Jimeno-Yepes, Alan R. Aronson
2010	J	`jnl`	Knowledge-based biomedical word sense disambiguation: comparison of approaches. BMC Bioinform. Antonio Jimeno-Yepes, Alan R. Aronson
2010	C	`conf`	Query Expansion for UMLS Metathesaurus Disambiguation Based on Automatic Corpus Extraction. ICMLA Antonio Jimeno-Yepes, Alan R. Aronson
2010	J	`jnl`	UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical text. J. Biomed. Informatics Dina Demner-Fushman, James G. Mork, Sonya E. Shooshan, Alan R. Aronson
2009	J	`jnl`	A recent advance in the automatic indexing of the biomedical literature. J. Biomed. Informatics Aurélie Névéol, Sonya E. Shooshan, Susanne M. Humphrey, James G. Mork, Alan R. Aronson
2009	J	`jnl`	Comment on 'MeSH-up: effective MeSH text classification for improved document retrieval'. Bioinform. Aurélie Névéol, James G. Mork, Alan R. Aronson
2009	J	`jnl`	Natural language processing versus content-based image analysis for medical document retrieval. J. Assoc. Inf. Sci. Technol. Aurélie Névéol, Thomas Martin Deserno, Stéfan Jacques Darmoni, Mark Oliver Güld, Alan R. Aronson
2008	—	`conf`	Adoption and evaluation issues of automatic and computer aided indexing systems. ASIST Miguel E. Ruiz, Alan R. Aronson, Marjorie M. K. Hlava
2008	Misc	`conf`	Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing. AMIA Alan R. Aronson, James G. Mork, Aurélie Névéol, Sonya E. Shooshan, Dina Demner-Fushman
2007	—	`conf`	Automatic Indexing of Specialized Documents: Using Generic vs. Domain-Specific Document Representations. BioNLP@ACL Aurélie Névéol, James G. Mork, Alan R. Aronson
2007	—	`conf`	Combining Lexical and Semantic Methods of Inter-terminology Mapping Using the UMLS. MedInfo Kin Wah Fung, Olivier Bodenreider, Alan R. Aronson, William T. Hole, Suresh Srinivasan
2007	—	`conf`	Combining Resources to Find Answers to Biomedical Questions. TREC Dina Demner-Fushman, Susanne M. Humphrey, Nicholas C. Ide, Russell F. Loane, James G. Mork, Patrick Ruch, Miguel E. Ruiz, Lawrence H. Smith, W. John Wilbur, Alan R. Aronson
2007	Misc	`conf`	Fine-Grained Indexing of the Biomedical Literature: MeSH Subheading Attachment for a MEDLINE Indexing Tool. AMIA Aurélie Névéol, Sonya E. Shooshan, James G. Mork, Alan R. Aronson
2007	—	`conf`	From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches. BioNLP@ACL Alan R. Aronson, Olivier Bodenreider, Dina Demner-Fushman, Kin Wah Fung, Vivian K. Lee, James G. Mork, Aurélie Névéol, Lee B. Peters, Willie J. Rogers
2007	Misc	`conf`	Multiple Approaches to Fine-Grained Indexing of the Biomedical Literature. Pacific Symposium on Biocomputing Aurélie Névéol, Sonya E. Shooshan, Susanne M. Humphrey, Thomas C. Rindflesch, Alan R. Aronson
2007	—	`conf`	Using Discourse Analysis to Improve Text Categorization in MEDLINE. MedInfo Patrick Ruch, Antoine Geissbühler, Julien Gobeill, Frédéric Lisacek, Imad Tbahriti, Anne-Lise Veuthey, Alan R. Aronson
2006	A*	`conf`	Argumentative Feedback: A Linguistically-Motivated Term Expansion for Information Retrieval. ACL Patrick Ruch, Imad Tbahriti, Julien Gobeill, Alan R. Aronson
2006	—	`conf`	Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort. TREC Dina Demner-Fushman, Susanne M. Humphrey, Nicholas C. Ide, Russell F. Loane, Patrick Ruch, Miguel E. Ruiz, Lawrence H. Smith, Lorraine K. Tanabe, W. John Wilbur, Alan R. Aronson
2005	Misc	`conf`	Evaluation of French and English MeSH Indexing Systems with a Parallel Corpus. AMIA Aurélie Névéol, James G. Mork, Alan R. Aronson, Stéfan Jacques Darmoni
2005	—	`conf`	Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents. TREC Alan R. Aronson, Dina Demner-Fushman, Susanne M. Humphrey, Jimmy Lin, Patrick Ruch, Miguel E. Ruiz, Lawrence H. Smith, Lorraine K. Tanabe, W. John Wilbur, Hongfang Liu
2005	Misc	`conf`	Semi-Automatic Indexing of Full Text Biomedical Articles. AMIA Clifford W. Gay, Mehmet Kayaalp, Alan R. Aronson
2004	—	`conf`	Application of a Medical Text Indexer to an Online Dermatology Atlas. MedInfo George R. Kim, Alan R. Aronson, James G. Mork, Bernard A. Cohen, Christoph U. Lehmann
2004	—	`conf`	Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations. TREC Alan R. Aronson, Susanne M. Humphrey, Nicholas C. Ide, Won Kim, Russell F. Loane, James G. Mork, Lawrence H. Smith, Lorraine K. Tanabe, W. John Wilbur, Natalie Xie, Dina Demner-Fushman, Hongfang Liu
2004	—	`conf`	The NLM Indexing Initiative's Medical Text Indexer. MedInfo Alan R. Aronson, James G. Mork, Clifford W. Gay, Susanne M. Humphrey, Willie J. Rogers
2003	J	`jnl`	Case Report: Generating Hypotheses by Discovering Implicit Associations in the Literature: A Case Report of a Search for New Potential Therapeutic Uses for Thalidomide. J. Am. Medical Informatics Assoc. Marc Weeber, Rein Vos, Henny Klein, Lolkje T. W. de Jong-van den Berg, Alan R. Aronson, Grietje Molema
2003	Misc	`conf`	Gene Indexing: Characterization and Analysis of NLM's GeneRIFs. AMIA Joyce A. Mitchell, Alan R. Aronson, James G. Mork, Lillian C. Folk, Susanne M. Humphrey, Janice M. Ward
2003	—	`conf`	Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics. TREC Mehmet Kayaalp, Alan R. Aronson, Susanne M. Humphrey, Nicholas C. Ide, Lorraine K. Tanabe, Lawrence H. Smith, Dina Demner-Fushman, Russell F. Loane, James G. Mork, Olivier Bodenreider
2003	Misc	`conf`	Semantic Relations Asserting the Etiology of Genetic Diseases. AMIA Thomas C. Rindflesch, Bisharah Libbus, Dimitar Hristovski, Alan R. Aronson, Halil Kilicoglu
2003	J	`jnl`	Towards linking patients and clinical information: detecting UMLS concepts in e-mail. J. Biomed. Informatics Patricia Flatley Brennan, Alan R. Aronson
2003	Misc	`conf`	UMLS Language and Vocabulary Tools: AMIA 2003 Open Source Expo. AMIA Allen C. Browne, Guy Divita, Alan R. Aronson, Alexa T. McCray
2002	Misc	`conf`	A study of abbreviations in MEDLINE abstracts. AMIA Hongfang Liu, Alan R. Aronson, Carol Friedman
2002	Misc	`conf`	Finding UMLS Metathesaurus concepts in MEDLINE. AMIA Suresh Srinivasan, Thomas C. Rindflesch, William T. Hole, Alan R. Aronson, James G. Mork
2002	Misc	`conf`	Mining the Epidemiological Literature for Risk Factors and Incidence Data of Kawasaki Disease. AMIA Len Y. Tanaka, Alan R. Aronson, Marc Weeber
2001	Misc	`conf`	Automatic MeSH term assignment and quality assessment. AMIA Won Kim, Alan R. Aronson, W. John Wilbur
2001	Misc	`conf`	Developing a test collection for biomedical word sense disambiguation. AMIA Marc Weeber, James G. Mork, Alan R. Aronson
2001	Misc	`conf`	Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program. AMIA Alan R. Aronson
2000	Misc	`conf`	Text-based discovery in biomedicine: the architecture of the DAD-system. AMIA Marc Weeber, Henny Klein, Alan R. Aronson, James G. Mork, Lolkje T. W. de Jong-van den Berg, Rein Vos
2000	Misc	`conf`	The NLM Indexing Initiative. AMIA Alan R. Aronson, Olivier Bodenreider, Florence Chang, Susanne M. Humphrey, James G. Mork, Stuart J. Nelson, Thomas C. Rindflesch, W. John Wilbur
1999	Misc	`conf`	Analysis of biomedical text for chemical names: a comparison of three methods. AMIA W. John Wilbur, George F. Hazard Jr., Guy Divita, James G. Mork, Alan R. Aronson, Allen C. Browne
1999	Misc	`conf`	Automated Assignment of Medical Subject Headings. AMIA Stuart J. Nelson, Alan R. Aronson, Tamas E. Doszkocs, W. John Wilbur, Olivier Bodenreider, H. Florence Chang, James G. Mork, Alexa T. McCray
1999	Misc	`conf`	From Bibliography to Test Collection: Enhancing Topical Relevance Assessment for Bibliographic Information Retrieval System Evaluation. AMIA Carol A. Bean, C. R. Selden, Thomas C. Rindflesch, Alan R. Aronson
1999	J	`jnl`	Hierarchical Concept Indexing of Full-Text Documents in the Unified Medical Language System® Information Sources Map. J. Am. Soc. Inf. Sci. Lawrence W. Wright, Holly K. Grossetta Nardini, Alan R. Aronson, Thomas C. Rindflesch
1999	Misc	`conf`	Mining molecular binding terminology from biomedical text. AMIA Thomas C. Rindflesch, Lawrence Hunter, Alan R. Aronson
1997	Misc	`conf`	Query expansion using the UMLS Metathesaurus. AMIA Alan R. Aronson, Thomas C. Rindflesch
1994	—	`conf`	Exploiting a Large Thesaurus for Information Retrieval. RIAO Alan R. Aronson
1982	J	`jnl`	On Interpretations of Relational Languages and Solutions to the Implied Constraint Problem. ACM Trans. Database Syst. Barry E. Jacobs, Alan R. Aronson, Anthony C. Klug
1980	J	`jnl`	A Note on Fuzzy Deduction. J. ACM Alan R. Aronson, Barry E. Jacobs, Jack Minker
1976	J	`jnl`	Grammatical inference by hill climbing. Inf. Sci. Craig M. Cook, Azriel Rosenfeld, Alan R. Aronson