Alan Christoffels

17 papers B 1Journal 15
YearRankTypeTitle / Venue / Authors
2024 J jnl
Increasing the presence of BIPOC researchers in computational science.
Nat. Comput. Sci.
Christine Yifeng Chen, Alan Christoffels, Roger Dube, Kamuela Enos, Juan E. Gilbert, Sanmi Koyejo, Jason Leigh, Carlo Liquido, Amy McKee, Kari Noe, Tai-Quan Peng, Karaitiana Taiuru
2024 J jnl
Publisher Correction: Increasing the presence of BIPOC researchers in computational science.
Nat. Comput. Sci.
Christine Yifeng Chen, Alan Christoffels, Roger Dube, Kamuela Enos, Juan E. Gilbert, Sanmi Koyejo, Jason Leigh, Carlo Liquido, Amy McKee, Kari Noe, Tai-Quan Peng, Karaitiana Taiuru
2020 J jnl
COMBAT-TB-NeoDB: fostering tuberculosis research through integrative analysis using graph database technologies.
Bioinform.
Thoba Lose, Peter van Heusden, Alan Christoffels
2019 — ch.
Genome Annotation: Perspective From Bacterial Genomes.
Encyclopedia of Bioinformatics and Computational Biology (3)
Alan Christoffels, Peter van Heusden
2018 J jnl
Prediction of human-Bacillus anthracis protein-protein interactions using multi-layer neural network.
Bioinform.
Ibrahim Ahmed, Peter J. Witbooi, Alan Christoffels
2016 J jnl
Identification of phenotype-relevant differentially expressed genes in breast cancer demonstrates enhanced quantile discretization protocol's utility in multi-platform microarray data integration.
J. Bioinform. Comput. Biol.
Darlington S. Mapiye, Alan Christoffels, Junaid Gamieldien
2016 J jnl
Resistance related metabolic pathways for drug target identification in
BMC Bioinform.
Ruben Cloete, Ekow Oppon, Edwin Murungi, Wolf-Dieter Schubert, Alan Christoffels
2016 J jnl
SNiPhunter: A SNP-Based Search Engine.
Data
Werner Pieter Veldsman, Alan Christoffels
2016 J jnl
The Development of Computational Biology in South Africa: Successes Achieved and Lessons Learnt.
PLoS Comput. Biol.
Nicola J. Mulder, Alan Christoffels, Tulio de Oliveira, Junaid Gamieldien, Scott Hazelhurst, Fourie Joubert, Judit Kumuthini, Ché S. Pillay, Jacky L. Snoep, Özlem Tastan Bishop, Nicki Tiffin
2015 J jnl
Inferring bona fide transfrags in RNA-Seq derived-transcriptome assemblies of non-model organisms.
BMC Bioinform.
Stanley Mbandi, Uljana Hesse, Peter van Heusden, Alan Christoffels
2012 J jnl
DAMPD: a manually curated antimicrobial peptide database.
Nucleic Acids Res.
Vijayaraghava Seshadri Sundararajan, Musa Nur Gabere, Ashley Pretorius, Saleem Adam, Alan Christoffels, Minna Lehväslaiho, John A. C. Archer, Vladimir B. Bajic
2011 J jnl
DDPC: Dragon Database of Genes associated with Prostate Cancer.
Nucleic Acids Res.
Monique Maqungo, Mandeep Kaur, Samuel K. Kwofie, Aleksandar Radovanovic, Ulf Schaefer, Sebastian Schmeier, Ekow Oppon, Alan Christoffels, Vladimir B. Bajic
2009 J jnl
Database for exploration of functional context of genes implicated in ovarian cancer.
Nucleic Acids Res.
Mandeep Kaur, Aleksandar Radovanovic, Magbubah Essack, Ulf Schaefer, Monique Maqungo, Tracey Kibler, Sebastian Schmeier, Alan Christoffels, Kothandaraman Narasimhan, Mahesh Choolani, Vladimir B. Bajic
2006 J jnl
Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome.
BMC Bioinform.
Alan Christoffels, Richard Bartfai, Hamsa Srinivasan, Hans Komen, Laszlo Orban
2005 B conf
Comparison of core promoters in Fugu rubripes and human.
APBC
Sin Lam Tan, Vidhu Choudhary, Alan Christoffels, Byrappa Venkatesh, Vladimir B. Bajic
2002 J jnl
Assessment of the parallelization approach of d2_cluster for high-performance sequence clustering.
J. Comput. Chem.
John E. Carpenter, Alan Christoffels, Yael Weinbach, Winston A. Hide
2001 J jnl
STACK: Sequence Tag Alignment and Consensus Knowledgebase.
Nucleic Acids Res.
Alan Christoffels, Antoine van Gelder, Gary Greyling, Robert Miller, Tania Hide, Winston A. Hide