Adrian V. Lee

13 papers Journal 12Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
Mutual information for detecting multi-class biomarkers when integrating multiple bulk or single-cell transcriptomic studies.
Bioinform.
Jian Zou, Zheqi Li, Neil Carleton, Steffi Oesterreich, Adrian V. Lee, George C. Tseng
2024 J jnl
Systems approach for congruence and selection of cancer models towards precision medicine.
PLoS Comput. Biol.
Jian Zou, Osama Shah, Yu-Chiao Chiu, Tianzhou Ma, Jennifer M. Atkinson, Steffi Oesterreich, Adrian V. Lee, George C. Tseng
2024 J jnl
iGenSig-Rx: an integral genomic signature based white-box tool for modeling cancer therapeutic responses using multi-omics data.
BMC Bioinform.
Sanghoon Lee, Min Sun, Yiheng Hu, Yue Wang, Md N. Islam, David Goerlitz, Peter C. Lucas, Adrian V. Lee, Sandra M. Swain, Gong Tang, Xiao-Song Wang
2022 J jnl
Semi-deconvolution of bulk and single-cell RNA-seq data with application to metastatic progression in breast cancer.
Bioinform.
Haoyun Lei, Xiaoyan A. Guo, Yifeng Tao, Kai Ding, Xuecong Fu, Steffi Oesterreich, Adrian V. Lee, Russell Schwartz
2021 J jnl
Inhibition of RPS6K reveals context-dependent Akt activity in luminal breast cancer cells.
PLoS Comput. Biol.
Cemal Erdem, Adrian V. Lee, D. Lansing Taylor, Timothy R. Lezon
2020 J jnl
Molecular Biology Information Service: an innovative medical library-based bioinformatics support service for biomedical researchers.
Briefings Bioinform.
Ansuman Chattopadhyay, Carrie L. Iwema, Barbara A. Epstein, Adrian V. Lee, Arthur S. Levine
2020 J jnl
Robust and accurate deconvolution of tumor populations uncovers evolutionary mechanisms of breast cancer metastasis.
Bioinform.
Yifeng Tao, Haoyun Lei, Xuecong Fu, Adrian V. Lee, Jian Ma, Russell Schwartz
2019 J jnl
Network-guided prediction of aromatase inhibitor response in breast cancer.
PLoS Comput. Biol.
Matthew Ruffalo, Roby Thomas, Jian Chen, Adrian V. Lee, Steffi Oesterreich, Ziv Bar-Joseph
2019 — conf
Phylogenies Derived from Matched Transcriptome Reveal the Evolution of Cell Populations and Temporal Order of Perturbed Pathways in Breast Cancer Brain Metastases.
ISMCO
Yifeng Tao, Haoyun Lei, Adrian V. Lee, Jian Ma, Russell Schwartz
2019 J jnl
Systematic discovery of the functional impact of somatic genome alterations in individual tumors through tumor-specific causal inference.
PLoS Comput. Biol.
Chunhui Cai, Gregory F. Cooper, Kevin N. Lu, Xiaojun Ma, Shuping Xu, Zhenlong Zhao, Xueer Chen, Yifan Xue, Adrian V. Lee, Nathan Clark, Vicky Chen, Songjian Lu, Lujia Chen, Liyue Yu, Harry Hochheiser, Xia Jiang, Q. Jane Wang, Xinghua Lu
2017 J jnl
Spatial Statistics for Segmenting Histological Structures in H&E Stained Tissue Images.
IEEE Trans. Medical Imaging
Luong Nguyen, Akif Burak Tosun, Jeffrey L. Fine, Adrian V. Lee, D. Lansing Taylor, S. Chakra Chennubhotla
2015 J jnl
The center for causal discovery of biomedical knowledge from big data.
J. Am. Medical Informatics Assoc.
Gregory F. Cooper, Ivet Bahar, Michael J. Becich, Panayiotis V. Benos, Jeremy M. Berg, Jeremy U. Espino, Clark Glymour, Rebecca Crowley Jacobson, Michelle Kienholz, Adrian V. Lee, Xinghua Lu, Richard Scheines
2014 J jnl
Analysis of interactions between the epigenome and structural mutability of the genome using Genboree workbench tools.
BMC Bioinform.
Cristian Coarfa, Christina Pichot, Andrew R. Jackson, Arpit Tandon, Viren Amin, Sriram Raghuraman, Sameer Paithankar, Adrian V. Lee, Sean E. McGuire, Aleksandar Milosavljevic