Adrian J. Shepherd

20 papers B 1Journal 15Unranked 1

Year	Rank	Type	Title / Venue / Authors
2020	J	`jnl`	Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein. PLoS Comput. Biol. Lenka Stejskal, William D. Lees, David S. Moss, Machaela Palor, Richard J. Bingham, Adrian J. Shepherd, Joe Grove
2020	J	`jnl`	OGRDB: a reference database of inferred immune receptor genes. Nucleic Acids Res. William D. Lees, Christian E. Busse, Martin Corcoran, Mats Ohlin, Cathrine Scheepers, Frederick A. Matsen IV, Gur Yaari, Corey T. Watson, Andrew M. Collins, Adrian J. Shepherd
2020	J	`jnl`	VDJbase: an adaptive immune receptor genotype and haplotype database. Nucleic Acids Res. Aviv Omer, Or Shemesh, Ayelet Peres, Pazit Polak, Adrian J. Shepherd, Corey T. Watson, Scott D. Boyd, Andrew M. Collins, William D. Lees, Gur Yaari
2019	—	`ch.`	Computational Immunogenetics. Encyclopedia of Bioinformatics and Computational Biology (2) Marta Gomez-Perosanz, Giulia Russo, Jose Luis Sanchez-Trincado Lopez, Marzio Pennisi, Pedro A. Reche, Adrian J. Shepherd, Francesco Pappalardo
2012	J	`jnl`	A text-mining system for extracting metabolic reactions from full-text articles. BMC Bioinform. Jan Czarnecki, Irene Nobeli, Adrian M. Smith, Adrian J. Shepherd
2010	J	`jnl`	A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2. Bioinform. William D. Lees, David S. Moss, Adrian J. Shepherd
2010	J	`jnl`	An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs. BMC Bioinform. Fernando García-Alcalde, Armando Blanco, Adrian J. Shepherd
2009	J	`jnl`	A realistic assessment of methods for extracting gene/protein interactions from free text. BMC Bioinform. Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd
2009	J	`jnl`	ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. Briefings Bioinform. Francesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew P. J. Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pierluigi Lollini, Kaye E. Basford, Vladimir Brusic
2009	—	`conf`	The ImmunoGrid Simulator: How to Use It. CIBB Francesco Pappalardo, Mark D. Halling-Brown, Marzio Pennisi, Ferdinando Chiacchio, Clare Sansom, Adrian J. Shepherd, David S. Moss, Santo Motta, Vladimir Brusic
2008	J	`jnl`	Towards a lightweight generic computational grid framework for biological research. BMC Bioinform. Mark D. Halling-Brown, David S. Moss, Adrian J. Shepherd
2007	J	`jnl`	Benchmarking natural-language parsers for biological applications using dependency graphs. BMC Bioinform. Andrew B. Clegg, Adrian J. Shepherd
2003	J	`jnl`	The CATH database: an extended protein family resource for structural and functional genomics. Nucleic Acids Res. Frances M. G. Pearl, C. F. Bennett, James E. Bray, Andrew P. Harrison, Nigel J. Martin, Adrian J. Shepherd, Ian Sillitoe, Janet M. Thornton, Christine A. Orengo
2002	J	`jnl`	PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resources. Bioinform. Adrian J. Shepherd, Nigel J. Martin, Roger G. Johnson, Paul Kellam, Christine A. Orengo
2001	J	`jnl`	A rapid classification protocol for the CATH Domain Database to support structural genomics. Nucleic Acids Res. Frances M. G. Pearl, Nigel J. Martin, James E. Bray, Daniel W. A. Buchan, Andrew P. Harrison, David A. Lee, Gabrielle A. Reeves, Adrian J. Shepherd, Ian Sillitoe, Annabel E. Todd, Janet M. Thornton, Christine A. Orengo
2001	J	`jnl`	VIDA: a virus database system for the organization of animal virus genome open reading frames. Nucleic Acids Res. M. Mar Albà, David A. Lee, Frances M. G. Pearl, Adrian J. Shepherd, Nigel J. Martin, Christine A. Orengo, Paul Kellam
1997	—	`book`	Second-order methods for neural networks - fast and reliable training methods for multi-layer perceptrons. Adrian J. Shepherd
1997	J	`jnl`	The New ERA in Supervised Learning. Neural Networks Denise Gorse, Adrian J. Shepherd, John G. Taylor
1995	—	`—`	Novel second-order techniques and global optimisation methods for supervised training of multi-layer perceptrons. Adrian J. Shepherd
1993	B	`conf`	Traking global minima using a range expansion algorithm. ESANN Denise Gorse, Adrian J. Shepherd, John G. Taylor