Adam B. Olshen

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
SNACS: a tool for demultiplexing single-cell DNA sequencing data.
Bioinform.
Vanessa E. Kennedy, Ritu Roy, Cheryl A. C. Peretz, Andrew Koh, Elaine Tran, Catherine C. Smith, Adam B. Olshen
2024 J jnl
Torch-eCpG: a fast and scalable eQTM mapper for thousands of molecular phenotypes with graphical processing units.
BMC Bioinform.
Kord M. Kober, Liam Berger, Ritu Roy, Adam B. Olshen
2023 J jnl
Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?
BMC Bioinform.
Adam B. Olshen, Mark R. Segal
2013 J jnl
Assessing gene-level translational control from ribosome profiling.
Bioinform.
Adam B. Olshen, Andrew C. Hsieh, Craig R. Stumpf, Richard A. Olshen, Davide Ruggero, Barry S. Taylor
2011 J jnl
Clonality: an R package for testing clonal relatedness of two tumors from the same patient based on their genomic profiles.
Bioinform.
Irina Ostrovnaya, Venkatraman E. Seshan, Adam B. Olshen, Colin B. Begg
2011 J jnl
Parent-specific copy number in paired tumor-normal studies using circular binary segmentation.
Bioinform.
Adam B. Olshen, Henrik Bengtsson, Pierre Neuvial, Paul T. Spellman, Richard A. Olshen, Venkatraman E. Seshan
2010 J jnl
A classification model for distinguishing copy number variants from cancer-related alterations.
BMC Bioinform.
Irina Ostrovnaya, Gouri Nanjangud, Adam B. Olshen
2010 J jnl
Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis.
Bioinform.
Ronglai Shen, Adam B. Olshen, Marc Ladanyi
2009 J jnl
Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis.
Bioinform.
Ronglai Shen, Adam B. Olshen, Marc Ladanyi
2007 J jnl
A faster circular binary segmentation algorithm for the analysis of array CGH data.
Bioinform.
E. S. Venkatraman, Adam B. Olshen
2002 J jnl
Deriving quantitative conclusions from microarray expression data.
Bioinform.
Adam B. Olshen, Ajay N. Jain
2025 Best paper conf
Assessing the Effectiveness of the Tigress Obfuscator Against MOPSA and BinaryNinja.
CheckMATE
Nicolò Altamura, Enrico Bragastini, Marco Campion, Mila Dalla Preda
2026 Best paper preprint
ASSEMBLAGE-DEEPHISTORY: A Cross-Build Binary Dataset with Temporal Coverage.
arXiv
Chang Liu, Noah Fleischmann, Nicolò Altamura, Edward Raff, James Holt, Kristopher Micinski